Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc1bQ920F6 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc1bQ920F6 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc1bQ920F6 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.27■□□□□ 0.52
Smc1bQ920F6 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Smc1bQ920F6 Gm4995-201ENSMUST00000117247 432 ntBASIC18.27■□□□□ 0.52
Smc1bQ920F6 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Smc1bQ920F6 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.27■□□□□ 0.52
Smc1bQ920F6 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc1bQ920F6 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc1bQ920F6 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Smc1bQ920F6 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smc1bQ920F6 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smc1bQ920F6 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smc1bQ920F6 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smc1bQ920F6 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc1bQ920F6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc1bQ920F6 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc1bQ920F6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc1bQ920F6 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc1bQ920F6 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc1bQ920F6 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smc1bQ920F6 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Smc1bQ920F6 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.26■□□□□ 0.51
Smc1bQ920F6 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Smc1bQ920F6 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Smc1bQ920F6 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc1bQ920F6 Gm9727-201ENSMUST00000161387 555 ntBASIC18.26■□□□□ 0.51
Smc1bQ920F6 Auts2-212ENSMUST00000178555 309 ntBASIC18.26■□□□□ 0.51
Smc1bQ920F6 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc1bQ920F6 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc1bQ920F6 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smc1bQ920F6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc1bQ920F6 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smc1bQ920F6 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc1bQ920F6 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc1bQ920F6 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc1bQ920F6 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smc1bQ920F6 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc1bQ920F6 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1bQ920F6 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.25■□□□□ 0.51
Smc1bQ920F6 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1bQ920F6 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1bQ920F6 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1bQ920F6 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Smc1bQ920F6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1bQ920F6 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1bQ920F6 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1bQ920F6 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1bQ920F6 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1bQ920F6 Gm25745-201ENSMUST00000174945 133 ntBASIC18.25■□□□□ 0.51
Smc1bQ920F6 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.25■□□□□ 0.51
Smc1bQ920F6 AV026068-213ENSMUST00000223675 1171 ntBASIC18.25■□□□□ 0.51
Smc1bQ920F6 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1bQ920F6 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1bQ920F6 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1bQ920F6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1bQ920F6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1bQ920F6 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1bQ920F6 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1bQ920F6 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.25■□□□□ 0.51
Smc1bQ920F6 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1bQ920F6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1bQ920F6 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Smc1bQ920F6 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc1bQ920F6 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc1bQ920F6 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc1bQ920F6 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Smc1bQ920F6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc1bQ920F6 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.24■□□□□ 0.51
Smc1bQ920F6 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.24■□□□□ 0.51
Smc1bQ920F6 Gm6089-201ENSMUST00000197666 938 ntBASIC18.24■□□□□ 0.51
Smc1bQ920F6 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc1bQ920F6 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.24■□□□□ 0.51
Smc1bQ920F6 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.24■□□□□ 0.51
Smc1bQ920F6 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smc1bQ920F6 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smc1bQ920F6 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Smc1bQ920F6 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc1bQ920F6 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc1bQ920F6 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.24■□□□□ 0.51
Smc1bQ920F6 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Smc1bQ920F6 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Smc1bQ920F6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc1bQ920F6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Smc1bQ920F6 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc1bQ920F6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smc1bQ920F6 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smc1bQ920F6 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc1bQ920F6 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smc1bQ920F6 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Smc1bQ920F6 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc1bQ920F6 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.23■□□□□ 0.51
Smc1bQ920F6 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smc1bQ920F6 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc1bQ920F6 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.23■□□□□ 0.51
Smc1bQ920F6 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smc1bQ920F6 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc1bQ920F6 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc1bQ920F6 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms