Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb18Q91Y02 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb18Q91Y02 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb18Q91Y02 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdhb18Q91Y02 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb18Q91Y02 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhb18Q91Y02 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb18Q91Y02 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb18Q91Y02 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb18Q91Y02 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb18Q91Y02 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhb18Q91Y02 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhb18Q91Y02 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhb18Q91Y02 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb18Q91Y02 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdhb18Q91Y02 Gm14494-201ENSMUST00000118786 435 ntBASIC16.55■□□□□ 0.24
Pcdhb18Q91Y02 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb18Q91Y02 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb18Q91Y02 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhb18Q91Y02 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.55■□□□□ 0.24
Pcdhb18Q91Y02 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdhb18Q91Y02 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdhb18Q91Y02 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.55■□□□□ 0.24
Pcdhb18Q91Y02 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb18Q91Y02 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.55■□□□□ 0.24
Pcdhb18Q91Y02 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb18Q91Y02 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb18Q91Y02 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb18Q91Y02 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdhb18Q91Y02 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb18Q91Y02 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb18Q91Y02 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb18Q91Y02 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhb18Q91Y02 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb18Q91Y02 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhb18Q91Y02 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb18Q91Y02 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhb18Q91Y02 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb18Q91Y02 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.54■□□□□ 0.24
Pcdhb18Q91Y02 Gm2756-201ENSMUST00000195851 400 ntBASIC16.54■□□□□ 0.24
Pcdhb18Q91Y02 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.54■□□□□ 0.24
Pcdhb18Q91Y02 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.54■□□□□ 0.24
Pcdhb18Q91Y02 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb18Q91Y02 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb18Q91Y02 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb18Q91Y02 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhb18Q91Y02 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb18Q91Y02 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhb18Q91Y02 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb18Q91Y02 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb18Q91Y02 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb18Q91Y02 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb18Q91Y02 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb18Q91Y02 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb18Q91Y02 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb18Q91Y02 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb18Q91Y02 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb18Q91Y02 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb18Q91Y02 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb18Q91Y02 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdhb18Q91Y02 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdhb18Q91Y02 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb18Q91Y02 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.53■□□□□ 0.24
Pcdhb18Q91Y02 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdhb18Q91Y02 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb18Q91Y02 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.53■□□□□ 0.24
Pcdhb18Q91Y02 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb18Q91Y02 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb18Q91Y02 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb18Q91Y02 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb18Q91Y02 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb18Q91Y02 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb18Q91Y02 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb18Q91Y02 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb18Q91Y02 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.52■□□□□ 0.24
Pcdhb18Q91Y02 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb18Q91Y02 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb18Q91Y02 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.52■□□□□ 0.24
Pcdhb18Q91Y02 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb18Q91Y02 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhb18Q91Y02 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb18Q91Y02 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdhb18Q91Y02 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb18Q91Y02 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
Pcdhb18Q91Y02 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb18Q91Y02 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb18Q91Y02 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhb18Q91Y02 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb18Q91Y02 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb18Q91Y02 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhb18Q91Y02 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb18Q91Y02 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.52■□□□□ 0.24
Pcdhb18Q91Y02 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb18Q91Y02 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.52■□□□□ 0.24
Pcdhb18Q91Y02 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb18Q91Y02 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.52■□□□□ 0.24
Pcdhb18Q91Y02 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.52■□□□□ 0.24
Pcdhb18Q91Y02 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.52■□□□□ 0.24
Pcdhb18Q91Y02 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb18Q91Y02 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms