Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb22Q91XZ8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb22Q91XZ8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Pcdhb22Q91XZ8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhb22Q91XZ8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb22Q91XZ8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb22Q91XZ8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb22Q91XZ8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhb22Q91XZ8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdhb22Q91XZ8 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.49■□□□□ 0.55
Pcdhb22Q91XZ8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.49■□□□□ 0.55
Pcdhb22Q91XZ8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.49■□□□□ 0.55
Pcdhb22Q91XZ8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb22Q91XZ8 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb22Q91XZ8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb22Q91XZ8 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdhb22Q91XZ8 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb22Q91XZ8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb22Q91XZ8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb22Q91XZ8 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb22Q91XZ8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhb22Q91XZ8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhb22Q91XZ8 Gm8097-201ENSMUST00000117903 829 ntBASIC18.48■□□□□ 0.55
Pcdhb22Q91XZ8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb22Q91XZ8 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb22Q91XZ8 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb22Q91XZ8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb22Q91XZ8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdhb22Q91XZ8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb22Q91XZ8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb22Q91XZ8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb22Q91XZ8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb22Q91XZ8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdhb22Q91XZ8 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb22Q91XZ8 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb22Q91XZ8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb22Q91XZ8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdhb22Q91XZ8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb22Q91XZ8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Pcdhb22Q91XZ8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb22Q91XZ8 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb22Q91XZ8 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb22Q91XZ8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Pcdhb22Q91XZ8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb22Q91XZ8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb22Q91XZ8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb22Q91XZ8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb22Q91XZ8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb22Q91XZ8 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb22Q91XZ8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb22Q91XZ8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Pcdhb22Q91XZ8 Dancr-204ENSMUST00000132389 2347 ntBASIC18.46■□□□□ 0.55
Pcdhb22Q91XZ8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb22Q91XZ8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb22Q91XZ8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb22Q91XZ8 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb22Q91XZ8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb22Q91XZ8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdhb22Q91XZ8 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb22Q91XZ8 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdhb22Q91XZ8 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb22Q91XZ8 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb22Q91XZ8 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdhb22Q91XZ8 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb22Q91XZ8 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb22Q91XZ8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb22Q91XZ8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhb22Q91XZ8 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb22Q91XZ8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb22Q91XZ8 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb22Q91XZ8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdhb22Q91XZ8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb22Q91XZ8 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Pcdhb22Q91XZ8 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb22Q91XZ8 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Pcdhb22Q91XZ8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb22Q91XZ8 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb22Q91XZ8 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb22Q91XZ8 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pcdhb22Q91XZ8 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb22Q91XZ8 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdhb22Q91XZ8 Gm27741-201ENSMUST00000185060 237 ntBASIC18.45■□□□□ 0.54
Pcdhb22Q91XZ8 Gm37444-201ENSMUST00000193605 439 ntBASIC18.45■□□□□ 0.54
Pcdhb22Q91XZ8 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb22Q91XZ8 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb22Q91XZ8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb22Q91XZ8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb22Q91XZ8 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb22Q91XZ8 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb22Q91XZ8 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb22Q91XZ8 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb22Q91XZ8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb22Q91XZ8 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb22Q91XZ8 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Pcdhb22Q91XZ8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
Pcdhb22Q91XZ8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb22Q91XZ8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pcdhb22Q91XZ8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb22Q91XZ8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb22Q91XZ8 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms