Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb6Q91XZ4 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb6Q91XZ4 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb6Q91XZ4 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb6Q91XZ4 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 App-207ENSMUST00000227737 2827 ntBASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 Gm14859-201ENSMUST00000117752 357 ntBASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb6Q91XZ4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Pcdhb6Q91XZ4 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb6Q91XZ4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb6Q91XZ4 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb6Q91XZ4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb6Q91XZ4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb6Q91XZ4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb6Q91XZ4 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb6Q91XZ4 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb6Q91XZ4 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb6Q91XZ4 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Pcdhb6Q91XZ4 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Pcdhb6Q91XZ4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.27■□□□□ 0.2
Pcdhb6Q91XZ4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.27■□□□□ 0.2
Pcdhb6Q91XZ4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb6Q91XZ4 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Pcdhb6Q91XZ4 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb6Q91XZ4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb6Q91XZ4 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.27■□□□□ 0.19
Pcdhb6Q91XZ4 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb6Q91XZ4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb6Q91XZ4 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb6Q91XZ4 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb6Q91XZ4 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhb6Q91XZ4 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb6Q91XZ4 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb6Q91XZ4 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb6Q91XZ4 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb6Q91XZ4 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb6Q91XZ4 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.25■□□□□ 0.19
Pcdhb6Q91XZ4 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.25■□□□□ 0.19
Pcdhb6Q91XZ4 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.25■□□□□ 0.19
Pcdhb6Q91XZ4 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.25■□□□□ 0.19
Pcdhb6Q91XZ4 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.25■□□□□ 0.19
Pcdhb6Q91XZ4 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.25■□□□□ 0.19
Pcdhb6Q91XZ4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms