Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb8Q91XZ2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb8Q91XZ2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb8Q91XZ2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Pcdhb8Q91XZ2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb8Q91XZ2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb8Q91XZ2 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb8Q91XZ2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb8Q91XZ2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb8Q91XZ2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb8Q91XZ2 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb8Q91XZ2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Pcdhb8Q91XZ2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb8Q91XZ2 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb8Q91XZ2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Pcdhb8Q91XZ2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb8Q91XZ2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb8Q91XZ2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb8Q91XZ2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb8Q91XZ2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb8Q91XZ2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdhb8Q91XZ2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb8Q91XZ2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb8Q91XZ2 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb8Q91XZ2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb8Q91XZ2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb8Q91XZ2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Pcdhb8Q91XZ2 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb8Q91XZ2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb8Q91XZ2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdhb8Q91XZ2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb8Q91XZ2 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb8Q91XZ2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb8Q91XZ2 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb8Q91XZ2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb8Q91XZ2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb8Q91XZ2 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb8Q91XZ2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb8Q91XZ2 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb8Q91XZ2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb8Q91XZ2 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhb8Q91XZ2 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb8Q91XZ2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb8Q91XZ2 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb8Q91XZ2 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb8Q91XZ2 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb8Q91XZ2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb8Q91XZ2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb8Q91XZ2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb8Q91XZ2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Pcdhb8Q91XZ2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb8Q91XZ2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhb8Q91XZ2 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb8Q91XZ2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdhb8Q91XZ2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdhb8Q91XZ2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb8Q91XZ2 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb8Q91XZ2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb8Q91XZ2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb8Q91XZ2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb8Q91XZ2 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb8Q91XZ2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb8Q91XZ2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Pcdhb8Q91XZ2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb8Q91XZ2 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb8Q91XZ2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb8Q91XZ2 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb8Q91XZ2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb8Q91XZ2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Pcdhb8Q91XZ2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Pcdhb8Q91XZ2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Pcdhb8Q91XZ2 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb8Q91XZ2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb8Q91XZ2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb8Q91XZ2 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb8Q91XZ2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb8Q91XZ2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb8Q91XZ2 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb8Q91XZ2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb8Q91XZ2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms