Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 Gm33142-201ENSMUST00000193913 867 ntBASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhga11Q91XY8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.34■□□□□ 0.05
Pcdhga11Q91XY8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga11Q91XY8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdhga11Q91XY8 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga11Q91XY8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga11Q91XY8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.34■□□□□ 0.05
Pcdhga11Q91XY8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga11Q91XY8 Gm9013-201ENSMUST00000132939 882 ntBASIC15.34■□□□□ 0.05
Pcdhga11Q91XY8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga11Q91XY8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga11Q91XY8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Pcdhga11Q91XY8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga11Q91XY8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga11Q91XY8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga11Q91XY8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Pcdhga11Q91XY8 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga11Q91XY8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga11Q91XY8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdhga11Q91XY8 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhga11Q91XY8 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga11Q91XY8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga11Q91XY8 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga11Q91XY8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga11Q91XY8 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga11Q91XY8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhga11Q91XY8 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhga11Q91XY8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Pcdhga11Q91XY8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhga11Q91XY8 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhga11Q91XY8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga11Q91XY8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
Pcdhga11Q91XY8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga11Q91XY8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga11Q91XY8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Pcdhga11Q91XY8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga11Q91XY8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga11Q91XY8 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.33■□□□□ 0.04
Pcdhga11Q91XY8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga11Q91XY8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdhga11Q91XY8 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.33■□□□□ 0.04
Pcdhga11Q91XY8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Pcdhga11Q91XY8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga11Q91XY8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga11Q91XY8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga11Q91XY8 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga11Q91XY8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Pcdhga11Q91XY8 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga11Q91XY8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdhga11Q91XY8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdhga11Q91XY8 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga11Q91XY8 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhga11Q91XY8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhga11Q91XY8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga11Q91XY8 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga11Q91XY8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga11Q91XY8 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Pcdhga11Q91XY8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga11Q91XY8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhga11Q91XY8 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga11Q91XY8 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga11Q91XY8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga11Q91XY8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga11Q91XY8 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Pcdhga11Q91XY8 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga11Q91XY8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga11Q91XY8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga11Q91XY8 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga11Q91XY8 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga11Q91XY8 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga11Q91XY8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga11Q91XY8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.32■□□□□ 0.04
Pcdhga11Q91XY8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga11Q91XY8 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga11Q91XY8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga11Q91XY8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhga11Q91XY8 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga11Q91XY8 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga11Q91XY8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.31■□□□□ 0.04
Pcdhga11Q91XY8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms