Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx41Q91VN6 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ddx41Q91VN6 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx41Q91VN6 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx41Q91VN6 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx41Q91VN6 Gm18733-201ENSMUST00000173950 856 ntBASIC18.16■□□□□ 0.5
Ddx41Q91VN6 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx41Q91VN6 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx41Q91VN6 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx41Q91VN6 Gm6376-201ENSMUST00000209407 580 ntBASIC18.16■□□□□ 0.5
Ddx41Q91VN6 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.16■□□□□ 0.5
Ddx41Q91VN6 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx41Q91VN6 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx41Q91VN6 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ddx41Q91VN6 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ddx41Q91VN6 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ddx41Q91VN6 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx41Q91VN6 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ddx41Q91VN6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx41Q91VN6 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx41Q91VN6 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx41Q91VN6 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx41Q91VN6 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx41Q91VN6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx41Q91VN6 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx41Q91VN6 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx41Q91VN6 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx41Q91VN6 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx41Q91VN6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx41Q91VN6 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx41Q91VN6 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx41Q91VN6 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx41Q91VN6 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx41Q91VN6 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ddx41Q91VN6 Gm7862-201ENSMUST00000121461 292 ntBASIC18.15■□□□□ 0.5
Ddx41Q91VN6 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.15■□□□□ 0.5
Ddx41Q91VN6 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx41Q91VN6 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.15■□□□□ 0.5
Ddx41Q91VN6 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.15■□□□□ 0.5
Ddx41Q91VN6 AW822252-206ENSMUST00000208904 237 ntBASIC18.15■□□□□ 0.5
Ddx41Q91VN6 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx41Q91VN6 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ddx41Q91VN6 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ddx41Q91VN6 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx41Q91VN6 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx41Q91VN6 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ddx41Q91VN6 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx41Q91VN6 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx41Q91VN6 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx41Q91VN6 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx41Q91VN6 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx41Q91VN6 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ddx41Q91VN6 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Ddx41Q91VN6 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ddx41Q91VN6 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx41Q91VN6 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ddx41Q91VN6 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx41Q91VN6 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx41Q91VN6 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.14■□□□□ 0.49
Ddx41Q91VN6 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Ddx41Q91VN6 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.14■□□□□ 0.49
Ddx41Q91VN6 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx41Q91VN6 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ddx41Q91VN6 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx41Q91VN6 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx41Q91VN6 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Ddx41Q91VN6 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx41Q91VN6 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx41Q91VN6 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx41Q91VN6 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx41Q91VN6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx41Q91VN6 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ddx41Q91VN6 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx41Q91VN6 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx41Q91VN6 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx41Q91VN6 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx41Q91VN6 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx41Q91VN6 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ddx41Q91VN6 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ddx41Q91VN6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx41Q91VN6 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx41Q91VN6 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx41Q91VN6 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx41Q91VN6 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx41Q91VN6 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.13■□□□□ 0.49
Ddx41Q91VN6 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx41Q91VN6 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx41Q91VN6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx41Q91VN6 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx41Q91VN6 Gm25745-201ENSMUST00000174945 133 ntBASIC18.13■□□□□ 0.49
Ddx41Q91VN6 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.13■□□□□ 0.49
Ddx41Q91VN6 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.13■□□□□ 0.49
Ddx41Q91VN6 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.13■□□□□ 0.49
Ddx41Q91VN6 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ddx41Q91VN6 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.13■□□□□ 0.49
Ddx41Q91VN6 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.13■□□□□ 0.49
Ddx41Q91VN6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ddx41Q91VN6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx41Q91VN6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx41Q91VN6 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms