Protein–RNA interactions for Protein: Q91VH2

Snx9, Sorting nexin-9, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx9Q91VH2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx9Q91VH2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx9Q91VH2 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.65■□□□□ 0.26
Snx9Q91VH2 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.65■□□□□ 0.26
Snx9Q91VH2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx9Q91VH2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Snx9Q91VH2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx9Q91VH2 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx9Q91VH2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx9Q91VH2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Snx9Q91VH2 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx9Q91VH2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx9Q91VH2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx9Q91VH2 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx9Q91VH2 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx9Q91VH2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx9Q91VH2 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Snx9Q91VH2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.64■□□□□ 0.26
Snx9Q91VH2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Snx9Q91VH2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Snx9Q91VH2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Snx9Q91VH2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx9Q91VH2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Snx9Q91VH2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Snx9Q91VH2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx9Q91VH2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx9Q91VH2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx9Q91VH2 Gm4535-201ENSMUST00000182274 558 ntBASIC16.64■□□□□ 0.25
Snx9Q91VH2 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Snx9Q91VH2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx9Q91VH2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx9Q91VH2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx9Q91VH2 Gm10355-201ENSMUST00000097146 517 ntBASIC16.64■□□□□ 0.25
Snx9Q91VH2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.64■□□□□ 0.25
Snx9Q91VH2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.64■□□□□ 0.25
Snx9Q91VH2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Snx9Q91VH2 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx9Q91VH2 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx9Q91VH2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx9Q91VH2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx9Q91VH2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx9Q91VH2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx9Q91VH2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.63■□□□□ 0.25
Snx9Q91VH2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx9Q91VH2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx9Q91VH2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Snx9Q91VH2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx9Q91VH2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx9Q91VH2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.63■□□□□ 0.25
Snx9Q91VH2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx9Q91VH2 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.63■□□□□ 0.25
Snx9Q91VH2 Gm7862-201ENSMUST00000121461 292 ntBASIC16.63■□□□□ 0.25
Snx9Q91VH2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Snx9Q91VH2 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Snx9Q91VH2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.63■□□□□ 0.25
Snx9Q91VH2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Snx9Q91VH2 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.63■□□□□ 0.25
Snx9Q91VH2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx9Q91VH2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Snx9Q91VH2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx9Q91VH2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx9Q91VH2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Snx9Q91VH2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx9Q91VH2 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.63■□□□□ 0.25
Snx9Q91VH2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.63■□□□□ 0.25
Snx9Q91VH2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snx9Q91VH2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snx9Q91VH2 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snx9Q91VH2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Snx9Q91VH2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snx9Q91VH2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snx9Q91VH2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.62■□□□□ 0.25
Snx9Q91VH2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.62■□□□□ 0.25
Snx9Q91VH2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Snx9Q91VH2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Snx9Q91VH2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snx9Q91VH2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Snx9Q91VH2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snx9Q91VH2 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Snx9Q91VH2 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Snx9Q91VH2 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Snx9Q91VH2 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.62■□□□□ 0.25
Snx9Q91VH2 Gm18195-201ENSMUST00000207604 706 ntBASIC16.62■□□□□ 0.25
Snx9Q91VH2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snx9Q91VH2 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snx9Q91VH2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Snx9Q91VH2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snx9Q91VH2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Snx9Q91VH2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snx9Q91VH2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snx9Q91VH2 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snx9Q91VH2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snx9Q91VH2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Snx9Q91VH2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snx9Q91VH2 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snx9Q91VH2 Gm13418-201ENSMUST00000119097 944 ntBASIC16.61■□□□□ 0.25
Snx9Q91VH2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Snx9Q91VH2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Snx9Q91VH2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Snx9Q91VH2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms