Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H1fooQ8VIK3 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.31□□□□□ -0.28
H1fooQ8VIK3 Prob1-201ENSMUST00000097619 3021 ntBASIC13.31□□□□□ -0.28
H1fooQ8VIK3 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.31□□□□□ -0.28
H1fooQ8VIK3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H1fooQ8VIK3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H1fooQ8VIK3 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H1fooQ8VIK3 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H1fooQ8VIK3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H1fooQ8VIK3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H1fooQ8VIK3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
H1fooQ8VIK3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.31□□□□□ -0.28
H1fooQ8VIK3 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H1fooQ8VIK3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H1fooQ8VIK3 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H1fooQ8VIK3 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H1fooQ8VIK3 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H1fooQ8VIK3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H1fooQ8VIK3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
H1fooQ8VIK3 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
H1fooQ8VIK3 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.31□□□□□ -0.28
H1fooQ8VIK3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H1fooQ8VIK3 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H1fooQ8VIK3 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.31□□□□□ -0.28
H1fooQ8VIK3 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H1fooQ8VIK3 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.31□□□□□ -0.28
H1fooQ8VIK3 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H1fooQ8VIK3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
H1fooQ8VIK3 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H1fooQ8VIK3 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H1fooQ8VIK3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Gm11950-201ENSMUST00000121615 838 ntBASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Gm25016-201ENSMUST00000158399 131 ntBASIC13.29□□□□□ -0.28
H1fooQ8VIK3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Gm6345-202ENSMUST00000180900 204 ntBASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H1fooQ8VIK3 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H1fooQ8VIK3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
H1fooQ8VIK3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H1fooQ8VIK3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
H1fooQ8VIK3 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms