Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lmcd1Q8VEE1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lmcd1Q8VEE1 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lmcd1Q8VEE1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lmcd1Q8VEE1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Lmcd1Q8VEE1 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lmcd1Q8VEE1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lmcd1Q8VEE1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lmcd1Q8VEE1 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lmcd1Q8VEE1 Haglr-201ENSMUST00000100000 2085 ntBASIC16.85■□□□□ 0.29
Lmcd1Q8VEE1 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lmcd1Q8VEE1 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Lmcd1Q8VEE1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lmcd1Q8VEE1 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Lmcd1Q8VEE1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.85■□□□□ 0.29
Lmcd1Q8VEE1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lmcd1Q8VEE1 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Lmcd1Q8VEE1 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Lmcd1Q8VEE1 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lmcd1Q8VEE1 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lmcd1Q8VEE1 Gm27306-201ENSMUST00000183970 107 ntBASIC16.85■□□□□ 0.29
Lmcd1Q8VEE1 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lmcd1Q8VEE1 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Lmcd1Q8VEE1 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lmcd1Q8VEE1 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lmcd1Q8VEE1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lmcd1Q8VEE1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Lmcd1Q8VEE1 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lmcd1Q8VEE1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lmcd1Q8VEE1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
Lmcd1Q8VEE1 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.85■□□□□ 0.29
Lmcd1Q8VEE1 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lmcd1Q8VEE1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lmcd1Q8VEE1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lmcd1Q8VEE1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lmcd1Q8VEE1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.84■□□□□ 0.29
Lmcd1Q8VEE1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Lmcd1Q8VEE1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lmcd1Q8VEE1 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Lmcd1Q8VEE1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Lmcd1Q8VEE1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lmcd1Q8VEE1 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lmcd1Q8VEE1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Lmcd1Q8VEE1 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lmcd1Q8VEE1 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.84■□□□□ 0.29
Lmcd1Q8VEE1 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.84■□□□□ 0.29
Lmcd1Q8VEE1 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Lmcd1Q8VEE1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lmcd1Q8VEE1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lmcd1Q8VEE1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lmcd1Q8VEE1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lmcd1Q8VEE1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lmcd1Q8VEE1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lmcd1Q8VEE1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Lmcd1Q8VEE1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Lmcd1Q8VEE1 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Lmcd1Q8VEE1 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Lmcd1Q8VEE1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lmcd1Q8VEE1 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.83■□□□□ 0.28
Lmcd1Q8VEE1 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lmcd1Q8VEE1 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Lmcd1Q8VEE1 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.83■□□□□ 0.28
Lmcd1Q8VEE1 Gm18057-201ENSMUST00000208220 503 ntBASIC16.83■□□□□ 0.28
Lmcd1Q8VEE1 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.83■□□□□ 0.28
Lmcd1Q8VEE1 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Lmcd1Q8VEE1 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lmcd1Q8VEE1 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lmcd1Q8VEE1 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.83■□□□□ 0.28
Lmcd1Q8VEE1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lmcd1Q8VEE1 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lmcd1Q8VEE1 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Lmcd1Q8VEE1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lmcd1Q8VEE1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Lmcd1Q8VEE1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lmcd1Q8VEE1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Lmcd1Q8VEE1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.83■□□□□ 0.28
Lmcd1Q8VEE1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lmcd1Q8VEE1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lmcd1Q8VEE1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lmcd1Q8VEE1 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Lmcd1Q8VEE1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lmcd1Q8VEE1 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.82■□□□□ 0.28
Lmcd1Q8VEE1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lmcd1Q8VEE1 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.82■□□□□ 0.28
Lmcd1Q8VEE1 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lmcd1Q8VEE1 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.82■□□□□ 0.28
Lmcd1Q8VEE1 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lmcd1Q8VEE1 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lmcd1Q8VEE1 Mir8102-201ENSMUST00000184148 139 ntBASIC16.82■□□□□ 0.28
Lmcd1Q8VEE1 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lmcd1Q8VEE1 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lmcd1Q8VEE1 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lmcd1Q8VEE1 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Lmcd1Q8VEE1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lmcd1Q8VEE1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lmcd1Q8VEE1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lmcd1Q8VEE1 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lmcd1Q8VEE1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lmcd1Q8VEE1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lmcd1Q8VEE1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms