Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx39aQ8VDW0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx39aQ8VDW0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx39aQ8VDW0 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx39aQ8VDW0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx39aQ8VDW0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Ddx39aQ8VDW0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx39aQ8VDW0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx39aQ8VDW0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ddx39aQ8VDW0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.57■□□□□ 0.4
Ddx39aQ8VDW0 Gm15467-201ENSMUST00000120582 445 ntBASIC17.57■□□□□ 0.4
Ddx39aQ8VDW0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Ddx39aQ8VDW0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx39aQ8VDW0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx39aQ8VDW0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx39aQ8VDW0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx39aQ8VDW0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.57■□□□□ 0.4
Ddx39aQ8VDW0 Grk6-207ENSMUST00000225925 2769 ntBASIC17.57■□□□□ 0.4
Ddx39aQ8VDW0 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx39aQ8VDW0 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.57■□□□□ 0.4
Ddx39aQ8VDW0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx39aQ8VDW0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx39aQ8VDW0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx39aQ8VDW0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ddx39aQ8VDW0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx39aQ8VDW0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx39aQ8VDW0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ddx39aQ8VDW0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx39aQ8VDW0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx39aQ8VDW0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Ddx39aQ8VDW0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx39aQ8VDW0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Ddx39aQ8VDW0 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx39aQ8VDW0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx39aQ8VDW0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx39aQ8VDW0 Gm5682-201ENSMUST00000173402 505 ntBASIC17.56■□□□□ 0.4
Ddx39aQ8VDW0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx39aQ8VDW0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx39aQ8VDW0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx39aQ8VDW0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ddx39aQ8VDW0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx39aQ8VDW0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx39aQ8VDW0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ddx39aQ8VDW0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx39aQ8VDW0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.56■□□□□ 0.4
Ddx39aQ8VDW0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx39aQ8VDW0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx39aQ8VDW0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx39aQ8VDW0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ddx39aQ8VDW0 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Gm2213-201ENSMUST00000197485 688 ntBASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx39aQ8VDW0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx39aQ8VDW0 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.54■□□□□ 0.4
Ddx39aQ8VDW0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ddx39aQ8VDW0 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Ddx39aQ8VDW0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx39aQ8VDW0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx39aQ8VDW0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx39aQ8VDW0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.54■□□□□ 0.4
Ddx39aQ8VDW0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.54■□□□□ 0.4
Ddx39aQ8VDW0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx39aQ8VDW0 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.54■□□□□ 0.4
Ddx39aQ8VDW0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx39aQ8VDW0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.54■□□□□ 0.4
Ddx39aQ8VDW0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.54■□□□□ 0.4
Ddx39aQ8VDW0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx39aQ8VDW0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
Ddx39aQ8VDW0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx39aQ8VDW0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms