Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ndc1Q8VCB1 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ndc1Q8VCB1 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ndc1Q8VCB1 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ndc1Q8VCB1 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ndc1Q8VCB1 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ndc1Q8VCB1 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ndc1Q8VCB1 AW822252-206ENSMUST00000208904 237 ntBASIC14.95□□□□□ -0.02
Ndc1Q8VCB1 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ndc1Q8VCB1 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.95□□□□□ -0.02
Ndc1Q8VCB1 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ndc1Q8VCB1 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ndc1Q8VCB1 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ndc1Q8VCB1 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ndc1Q8VCB1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ndc1Q8VCB1 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ndc1Q8VCB1 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ndc1Q8VCB1 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ndc1Q8VCB1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ndc1Q8VCB1 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ndc1Q8VCB1 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ndc1Q8VCB1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ndc1Q8VCB1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
Ndc1Q8VCB1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ndc1Q8VCB1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ndc1Q8VCB1 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ndc1Q8VCB1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ndc1Q8VCB1 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.94□□□□□ -0.02
Ndc1Q8VCB1 Mir5131-201ENSMUST00000175426 93 ntBASIC14.94□□□□□ -0.02
Ndc1Q8VCB1 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.94□□□□□ -0.02
Ndc1Q8VCB1 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.94□□□□□ -0.02
Ndc1Q8VCB1 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ndc1Q8VCB1 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ndc1Q8VCB1 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ndc1Q8VCB1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ndc1Q8VCB1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ndc1Q8VCB1 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ndc1Q8VCB1 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ndc1Q8VCB1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ndc1Q8VCB1 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ndc1Q8VCB1 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ndc1Q8VCB1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ndc1Q8VCB1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ndc1Q8VCB1 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ndc1Q8VCB1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ndc1Q8VCB1 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ndc1Q8VCB1 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ndc1Q8VCB1 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ndc1Q8VCB1 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.94□□□□□ -0.02
Ndc1Q8VCB1 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ndc1Q8VCB1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ndc1Q8VCB1 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ndc1Q8VCB1 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Ndc1Q8VCB1 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ndc1Q8VCB1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ndc1Q8VCB1 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ndc1Q8VCB1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ndc1Q8VCB1 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ndc1Q8VCB1 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ndc1Q8VCB1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.92□□□□□ -0.02
Ndc1Q8VCB1 Gm10060-201ENSMUST00000212002 111 ntBASIC14.92□□□□□ -0.02
Ndc1Q8VCB1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.92□□□□□ -0.02
Ndc1Q8VCB1 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.92□□□□□ -0.02
Ndc1Q8VCB1 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ndc1Q8VCB1 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ndc1Q8VCB1 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.92□□□□□ -0.02
Ndc1Q8VCB1 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.92□□□□□ -0.02
Ndc1Q8VCB1 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ndc1Q8VCB1 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ndc1Q8VCB1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ndc1Q8VCB1 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms