Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.96□□□□□ -0.33
Nup35Q8R4R6 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Nup35Q8R4R6 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.96□□□□□ -0.33
Nup35Q8R4R6 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nup35Q8R4R6 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup35Q8R4R6 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.96□□□□□ -0.33
Nup35Q8R4R6 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup35Q8R4R6 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Nup35Q8R4R6 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup35Q8R4R6 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Nup35Q8R4R6 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup35Q8R4R6 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup35Q8R4R6 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nup35Q8R4R6 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nup35Q8R4R6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Nup35Q8R4R6 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nup35Q8R4R6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.96□□□□□ -0.33
Nup35Q8R4R6 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.96□□□□□ -0.33
Nup35Q8R4R6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.96□□□□□ -0.33
Nup35Q8R4R6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.96□□□□□ -0.33
Nup35Q8R4R6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Nup35Q8R4R6 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup35Q8R4R6 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Nup35Q8R4R6 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup35Q8R4R6 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nup35Q8R4R6 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup35Q8R4R6 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup35Q8R4R6 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup35Q8R4R6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nup35Q8R4R6 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup35Q8R4R6 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup35Q8R4R6 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup35Q8R4R6 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup35Q8R4R6 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup35Q8R4R6 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup35Q8R4R6 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup35Q8R4R6 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup35Q8R4R6 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Nup35Q8R4R6 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Nup35Q8R4R6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nup35Q8R4R6 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup35Q8R4R6 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup35Q8R4R6 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nup35Q8R4R6 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup35Q8R4R6 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup35Q8R4R6 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup35Q8R4R6 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup35Q8R4R6 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.95□□□□□ -0.34
Nup35Q8R4R6 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nup35Q8R4R6 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup35Q8R4R6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup35Q8R4R6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup35Q8R4R6 Gm11336-201ENSMUST00000118168 334 ntBASIC12.95□□□□□ -0.34
Nup35Q8R4R6 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Nup35Q8R4R6 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup35Q8R4R6 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup35Q8R4R6 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup35Q8R4R6 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Nup35Q8R4R6 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup35Q8R4R6 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup35Q8R4R6 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup35Q8R4R6 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup35Q8R4R6 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup35Q8R4R6 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup35Q8R4R6 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup35Q8R4R6 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.95□□□□□ -0.34
Nup35Q8R4R6 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.95□□□□□ -0.34
Nup35Q8R4R6 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.95□□□□□ -0.34
Nup35Q8R4R6 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup35Q8R4R6 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup35Q8R4R6 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Nup35Q8R4R6 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup35Q8R4R6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup35Q8R4R6 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup35Q8R4R6 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.94□□□□□ -0.34
Nup35Q8R4R6 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.94□□□□□ -0.34
Nup35Q8R4R6 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup35Q8R4R6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.94□□□□□ -0.34
Nup35Q8R4R6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup35Q8R4R6 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup35Q8R4R6 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.94□□□□□ -0.34
Nup35Q8R4R6 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup35Q8R4R6 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Nup35Q8R4R6 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup35Q8R4R6 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms