Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cd109Q8R422 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cd109Q8R422 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cd109Q8R422 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cd109Q8R422 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC22.33■■□□□ 1.17
Cd109Q8R422 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC22.33■■□□□ 1.17
Cd109Q8R422 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cd109Q8R422 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cd109Q8R422 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Cd109Q8R422 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Cd109Q8R422 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Cd109Q8R422 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Cd109Q8R422 Gm13332-201ENSMUST00000120451 1398 ntBASIC22.33■■□□□ 1.16
Cd109Q8R422 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
Cd109Q8R422 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Cd109Q8R422 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Cd109Q8R422 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cd109Q8R422 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cd109Q8R422 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC22.32■■□□□ 1.16
Cd109Q8R422 Gm6226-201ENSMUST00000117765 1146 ntBASIC22.32■■□□□ 1.16
Cd109Q8R422 Gm11745-201ENSMUST00000121669 448 ntBASIC22.32■■□□□ 1.16
Cd109Q8R422 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Cd109Q8R422 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC22.32■■□□□ 1.16
Cd109Q8R422 Gm10576-201ENSMUST00000191927 825 ntBASIC22.32■■□□□ 1.16
Cd109Q8R422 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cd109Q8R422 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cd109Q8R422 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cd109Q8R422 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cd109Q8R422 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Cd109Q8R422 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cd109Q8R422 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
Cd109Q8R422 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cd109Q8R422 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Cd109Q8R422 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cd109Q8R422 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Cd109Q8R422 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cd109Q8R422 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC22.31■■□□□ 1.16
Cd109Q8R422 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Cd109Q8R422 Gm11453-201ENSMUST00000117318 1007 ntBASIC22.31■■□□□ 1.16
Cd109Q8R422 Gm11025-201ENSMUST00000140773 466 ntBASIC22.31■■□□□ 1.16
Cd109Q8R422 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC22.31■■□□□ 1.16
Cd109Q8R422 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC22.31■■□□□ 1.16
Cd109Q8R422 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cd109Q8R422 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Cd109Q8R422 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Cd109Q8R422 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cd109Q8R422 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cd109Q8R422 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Cd109Q8R422 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cd109Q8R422 Gm13337-201ENSMUST00000119183 1594 ntBASIC22.31■■□□□ 1.16
Cd109Q8R422 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cd109Q8R422 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cd109Q8R422 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Cd109Q8R422 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Cd109Q8R422 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Cd109Q8R422 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
Cd109Q8R422 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC22.31■■□□□ 1.16
Cd109Q8R422 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cd109Q8R422 AC160980.1-201ENSMUST00000224136 970 ntBASIC22.31■■□□□ 1.16
Cd109Q8R422 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cd109Q8R422 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cd109Q8R422 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Cd109Q8R422 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cd109Q8R422 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cd109Q8R422 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cd109Q8R422 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cd109Q8R422 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Cd109Q8R422 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cd109Q8R422 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cd109Q8R422 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cd109Q8R422 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cd109Q8R422 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Cd109Q8R422 Gm12008-201ENSMUST00000117791 755 ntBASIC22.3■■□□□ 1.16
Cd109Q8R422 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC22.3■■□□□ 1.16
Cd109Q8R422 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cd109Q8R422 Gm20553-201ENSMUST00000204205 844 ntBASIC22.3■■□□□ 1.16
Cd109Q8R422 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cd109Q8R422 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Cd109Q8R422 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cd109Q8R422 Nrn1-204ENSMUST00000224323 1779 ntBASIC22.3■■□□□ 1.16
Cd109Q8R422 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cd109Q8R422 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
Cd109Q8R422 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC22.29■■□□□ 1.16
Cd109Q8R422 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cd109Q8R422 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Cd109Q8R422 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cd109Q8R422 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cd109Q8R422 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC22.29■■□□□ 1.16
Cd109Q8R422 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cd109Q8R422 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC22.29■■□□□ 1.16
Cd109Q8R422 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC22.29■■□□□ 1.16
Cd109Q8R422 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cd109Q8R422 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Cd109Q8R422 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cd109Q8R422 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cd109Q8R422 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cd109Q8R422 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cd109Q8R422 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Cd109Q8R422 Gm15920-201ENSMUST00000118998 402 ntBASIC22.28■■□□□ 1.16
Cd109Q8R422 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms