Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Atf7Q8R0S1 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Atf7Q8R0S1 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atf7Q8R0S1 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atf7Q8R0S1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Atf7Q8R0S1 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atf7Q8R0S1 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atf7Q8R0S1 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Atf7Q8R0S1 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.71■□□□□ 0.59
Atf7Q8R0S1 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atf7Q8R0S1 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.71■□□□□ 0.59
Atf7Q8R0S1 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.71■□□□□ 0.59
Atf7Q8R0S1 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Atf7Q8R0S1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atf7Q8R0S1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Atf7Q8R0S1 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atf7Q8R0S1 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.71■□□□□ 0.59
Atf7Q8R0S1 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atf7Q8R0S1 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atf7Q8R0S1 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atf7Q8R0S1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atf7Q8R0S1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atf7Q8R0S1 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atf7Q8R0S1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atf7Q8R0S1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atf7Q8R0S1 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Atf7Q8R0S1 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atf7Q8R0S1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atf7Q8R0S1 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atf7Q8R0S1 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atf7Q8R0S1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atf7Q8R0S1 Gm14859-201ENSMUST00000117752 357 ntBASIC18.7■□□□□ 0.58
Atf7Q8R0S1 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Atf7Q8R0S1 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Atf7Q8R0S1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Atf7Q8R0S1 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Atf7Q8R0S1 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atf7Q8R0S1 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atf7Q8R0S1 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atf7Q8R0S1 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atf7Q8R0S1 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atf7Q8R0S1 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Atf7Q8R0S1 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atf7Q8R0S1 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atf7Q8R0S1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atf7Q8R0S1 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atf7Q8R0S1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Atf7Q8R0S1 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atf7Q8R0S1 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atf7Q8R0S1 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Atf7Q8R0S1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atf7Q8R0S1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Atf7Q8R0S1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atf7Q8R0S1 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.69■□□□□ 0.58
Atf7Q8R0S1 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atf7Q8R0S1 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atf7Q8R0S1 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atf7Q8R0S1 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atf7Q8R0S1 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atf7Q8R0S1 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atf7Q8R0S1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Atf7Q8R0S1 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.69■□□□□ 0.58
Atf7Q8R0S1 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Atf7Q8R0S1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.68■□□□□ 0.58
Atf7Q8R0S1 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atf7Q8R0S1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atf7Q8R0S1 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Atf7Q8R0S1 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
Atf7Q8R0S1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Atf7Q8R0S1 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atf7Q8R0S1 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atf7Q8R0S1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
Atf7Q8R0S1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Atf7Q8R0S1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Atf7Q8R0S1 Gm15165-201ENSMUST00000118140 502 ntBASIC18.68■□□□□ 0.58
Atf7Q8R0S1 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atf7Q8R0S1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.68■□□□□ 0.58
Atf7Q8R0S1 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.68■□□□□ 0.58
Atf7Q8R0S1 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atf7Q8R0S1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atf7Q8R0S1 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.68■□□□□ 0.58
Atf7Q8R0S1 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Atf7Q8R0S1 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms