Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3a1Q8K4Z5 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sf3a1Q8K4Z5 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sf3a1Q8K4Z5 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.39■□□□□ 0.7
Sf3a1Q8K4Z5 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
Sf3a1Q8K4Z5 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sf3a1Q8K4Z5 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sf3a1Q8K4Z5 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Sf3a1Q8K4Z5 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sf3a1Q8K4Z5 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sf3a1Q8K4Z5 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.39■□□□□ 0.69
Sf3a1Q8K4Z5 Gm9172-201ENSMUST00000212092 954 ntBASIC19.39■□□□□ 0.69
Sf3a1Q8K4Z5 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sf3a1Q8K4Z5 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Sf3a1Q8K4Z5 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sf3a1Q8K4Z5 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.39■□□□□ 0.69
Sf3a1Q8K4Z5 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.39■□□□□ 0.69
Sf3a1Q8K4Z5 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sf3a1Q8K4Z5 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sf3a1Q8K4Z5 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sf3a1Q8K4Z5 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sf3a1Q8K4Z5 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Sf3a1Q8K4Z5 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3a1Q8K4Z5 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3a1Q8K4Z5 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Sf3a1Q8K4Z5 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3a1Q8K4Z5 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3a1Q8K4Z5 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3a1Q8K4Z5 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.38■□□□□ 0.69
Sf3a1Q8K4Z5 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3a1Q8K4Z5 Gm24589-201ENSMUST00000116692 94 ntBASIC19.38■□□□□ 0.69
Sf3a1Q8K4Z5 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.38■□□□□ 0.69
Sf3a1Q8K4Z5 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3a1Q8K4Z5 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.38■□□□□ 0.69
Sf3a1Q8K4Z5 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.38■□□□□ 0.69
Sf3a1Q8K4Z5 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.38■□□□□ 0.69
Sf3a1Q8K4Z5 Gm7506-201ENSMUST00000207758 815 ntBASIC19.38■□□□□ 0.69
Sf3a1Q8K4Z5 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3a1Q8K4Z5 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3a1Q8K4Z5 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3a1Q8K4Z5 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3a1Q8K4Z5 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.38■□□□□ 0.69
Sf3a1Q8K4Z5 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Sf3a1Q8K4Z5 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3a1Q8K4Z5 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3a1Q8K4Z5 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3a1Q8K4Z5 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Sf3a1Q8K4Z5 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Sf3a1Q8K4Z5 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3a1Q8K4Z5 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3a1Q8K4Z5 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Sf3a1Q8K4Z5 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3a1Q8K4Z5 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Sf3a1Q8K4Z5 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.37■□□□□ 0.69
Sf3a1Q8K4Z5 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3a1Q8K4Z5 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Sf3a1Q8K4Z5 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.37■□□□□ 0.69
Sf3a1Q8K4Z5 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3a1Q8K4Z5 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3a1Q8K4Z5 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Sf3a1Q8K4Z5 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3a1Q8K4Z5 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Sf3a1Q8K4Z5 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3a1Q8K4Z5 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3a1Q8K4Z5 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3a1Q8K4Z5 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3a1Q8K4Z5 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3a1Q8K4Z5 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3a1Q8K4Z5 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3a1Q8K4Z5 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3a1Q8K4Z5 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3a1Q8K4Z5 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3a1Q8K4Z5 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3a1Q8K4Z5 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3a1Q8K4Z5 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3a1Q8K4Z5 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3a1Q8K4Z5 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3a1Q8K4Z5 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3a1Q8K4Z5 Gm27459-201ENSMUST00000184860 107 ntBASIC19.36■□□□□ 0.69
Sf3a1Q8K4Z5 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.36■□□□□ 0.69
Sf3a1Q8K4Z5 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3a1Q8K4Z5 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3a1Q8K4Z5 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3a1Q8K4Z5 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Sf3a1Q8K4Z5 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3a1Q8K4Z5 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3a1Q8K4Z5 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.36■□□□□ 0.69
Sf3a1Q8K4Z5 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3a1Q8K4Z5 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3a1Q8K4Z5 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3a1Q8K4Z5 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Sf3a1Q8K4Z5 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3a1Q8K4Z5 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3a1Q8K4Z5 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3a1Q8K4Z5 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3a1Q8K4Z5 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19.35■□□□□ 0.69
Sf3a1Q8K4Z5 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3a1Q8K4Z5 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
Sf3a1Q8K4Z5 Gm7153-201ENSMUST00000117092 455 ntBASIC19.35■□□□□ 0.69
Sf3a1Q8K4Z5 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms