Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clrn1Q8K445 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clrn1Q8K445 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Clrn1Q8K445 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.99□□□□□ -0.01
Clrn1Q8K445 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clrn1Q8K445 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Clrn1Q8K445 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Clrn1Q8K445 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clrn1Q8K445 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clrn1Q8K445 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Clrn1Q8K445 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.98□□□□□ -0.01
Clrn1Q8K445 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clrn1Q8K445 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clrn1Q8K445 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.98□□□□□ -0.01
Clrn1Q8K445 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clrn1Q8K445 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clrn1Q8K445 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clrn1Q8K445 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clrn1Q8K445 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clrn1Q8K445 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.98□□□□□ -0.01
Clrn1Q8K445 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clrn1Q8K445 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Clrn1Q8K445 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.98□□□□□ -0.01
Clrn1Q8K445 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Clrn1Q8K445 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clrn1Q8K445 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Clrn1Q8K445 Gm21362-201ENSMUST00000194272 928 ntBASIC14.98□□□□□ -0.01
Clrn1Q8K445 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clrn1Q8K445 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Clrn1Q8K445 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clrn1Q8K445 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clrn1Q8K445 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clrn1Q8K445 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Clrn1Q8K445 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Clrn1Q8K445 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clrn1Q8K445 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clrn1Q8K445 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Clrn1Q8K445 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clrn1Q8K445 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clrn1Q8K445 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Clrn1Q8K445 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clrn1Q8K445 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clrn1Q8K445 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.97□□□□□ -0.01
Clrn1Q8K445 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Clrn1Q8K445 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clrn1Q8K445 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clrn1Q8K445 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.97□□□□□ -0.01
Clrn1Q8K445 Gm17807-201ENSMUST00000186869 298 ntBASIC14.97□□□□□ -0.01
Clrn1Q8K445 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.97□□□□□ -0.01
Clrn1Q8K445 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.97□□□□□ -0.01
Clrn1Q8K445 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.97□□□□□ -0.01
Clrn1Q8K445 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clrn1Q8K445 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.97□□□□□ -0.01
Clrn1Q8K445 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clrn1Q8K445 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.97□□□□□ -0.01
Clrn1Q8K445 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clrn1Q8K445 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clrn1Q8K445 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clrn1Q8K445 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clrn1Q8K445 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Clrn1Q8K445 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clrn1Q8K445 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clrn1Q8K445 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clrn1Q8K445 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Clrn1Q8K445 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clrn1Q8K445 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clrn1Q8K445 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Clrn1Q8K445 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clrn1Q8K445 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Clrn1Q8K445 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Clrn1Q8K445 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.96□□□□□ -0.01
Clrn1Q8K445 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.96□□□□□ -0.01
Clrn1Q8K445 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clrn1Q8K445 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clrn1Q8K445 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.96□□□□□ -0.01
Clrn1Q8K445 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Clrn1Q8K445 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Clrn1Q8K445 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.96□□□□□ -0.01
Clrn1Q8K445 Mir6404-201ENSMUST00000183699 94 ntBASIC14.96□□□□□ -0.01
Clrn1Q8K445 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clrn1Q8K445 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clrn1Q8K445 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clrn1Q8K445 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Clrn1Q8K445 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
Clrn1Q8K445 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Clrn1Q8K445 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Clrn1Q8K445 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.95□□□□□ -0.02
Clrn1Q8K445 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.95□□□□□ -0.02
Clrn1Q8K445 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Clrn1Q8K445 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.95□□□□□ -0.02
Clrn1Q8K445 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.95□□□□□ -0.02
Clrn1Q8K445 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Clrn1Q8K445 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Clrn1Q8K445 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Clrn1Q8K445 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.95□□□□□ -0.02
Clrn1Q8K445 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.95□□□□□ -0.02
Clrn1Q8K445 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Clrn1Q8K445 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.95□□□□□ -0.02
Clrn1Q8K445 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Clrn1Q8K445 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms