Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Gm10418-201ENSMUST00000100943 576 ntBASIC10□□□□□ -0.81
Cystm1Q8K353 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC10□□□□□ -0.81
Cystm1Q8K353 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC10□□□□□ -0.81
Cystm1Q8K353 AC166341.7-201ENSMUST00000221698 126 ntBASIC10□□□□□ -0.81
Cystm1Q8K353 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Mtag2-201ENSMUST00000058665 714 ntBASIC10□□□□□ -0.81
Cystm1Q8K353 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC10□□□□□ -0.81
Cystm1Q8K353 Gm38391-201ENSMUST00000191720 4069 ntBASIC10□□□□□ -0.81
Cystm1Q8K353 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC9.99□□□□□ -0.81
Cystm1Q8K353 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Krtap5-1-202ENSMUST00000188274 742 ntBASIC9.99□□□□□ -0.81
Cystm1Q8K353 Gm37292-201ENSMUST00000192062 758 ntBASIC9.99□□□□□ -0.81
Cystm1Q8K353 Gm9484-201ENSMUST00000195892 1159 ntBASIC9.99□□□□□ -0.81
Cystm1Q8K353 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC9.99□□□□□ -0.81
Cystm1Q8K353 AC135963.1-201ENSMUST00000211640 717 ntBASIC9.99□□□□□ -0.81
Cystm1Q8K353 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 AC156016.1-201ENSMUST00000227190 1035 ntBASIC9.99□□□□□ -0.81
Cystm1Q8K353 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Gm43272-201ENSMUST00000200599 1584 ntBASIC9.99□□□□□ -0.81
Cystm1Q8K353 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC9.99□□□□□ -0.81
Cystm1Q8K353 AC167013.2-201ENSMUST00000228520 2684 ntBASIC9.99□□□□□ -0.81
Cystm1Q8K353 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Cystm1Q8K353 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cystm1Q8K353 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cystm1Q8K353 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cystm1Q8K353 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cystm1Q8K353 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cystm1Q8K353 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cystm1Q8K353 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cystm1Q8K353 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cystm1Q8K353 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms