Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Shtn1Q8K2Q9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Shtn1Q8K2Q9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Shtn1Q8K2Q9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Shtn1Q8K2Q9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Shtn1Q8K2Q9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
Shtn1Q8K2Q9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shtn1Q8K2Q9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shtn1Q8K2Q9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Shtn1Q8K2Q9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shtn1Q8K2Q9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shtn1Q8K2Q9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Shtn1Q8K2Q9 Gm27494-201ENSMUST00000184735 189 ntBASIC18.64■□□□□ 0.57
Shtn1Q8K2Q9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shtn1Q8K2Q9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Shtn1Q8K2Q9 Gm44335-201ENSMUST00000196879 141 ntBASIC18.64■□□□□ 0.57
Shtn1Q8K2Q9 Gm44297-201ENSMUST00000198304 141 ntBASIC18.64■□□□□ 0.57
Shtn1Q8K2Q9 Gm44346-201ENSMUST00000198851 141 ntBASIC18.64■□□□□ 0.57
Shtn1Q8K2Q9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shtn1Q8K2Q9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shtn1Q8K2Q9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.64■□□□□ 0.57
Shtn1Q8K2Q9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shtn1Q8K2Q9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shtn1Q8K2Q9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shtn1Q8K2Q9 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shtn1Q8K2Q9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shtn1Q8K2Q9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shtn1Q8K2Q9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shtn1Q8K2Q9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shtn1Q8K2Q9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shtn1Q8K2Q9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.63■□□□□ 0.57
Shtn1Q8K2Q9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Shtn1Q8K2Q9 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Shtn1Q8K2Q9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shtn1Q8K2Q9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Shtn1Q8K2Q9 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Shtn1Q8K2Q9 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC18.63■□□□□ 0.57
Shtn1Q8K2Q9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC18.63■□□□□ 0.57
Shtn1Q8K2Q9 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC18.63■□□□□ 0.57
Shtn1Q8K2Q9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shtn1Q8K2Q9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shtn1Q8K2Q9 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Shtn1Q8K2Q9 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Shtn1Q8K2Q9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shtn1Q8K2Q9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Shtn1Q8K2Q9 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.63■□□□□ 0.57
Shtn1Q8K2Q9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shtn1Q8K2Q9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shtn1Q8K2Q9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shtn1Q8K2Q9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shtn1Q8K2Q9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Shtn1Q8K2Q9 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shtn1Q8K2Q9 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Shtn1Q8K2Q9 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Shtn1Q8K2Q9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.62■□□□□ 0.57
Shtn1Q8K2Q9 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Shtn1Q8K2Q9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Shtn1Q8K2Q9 Gm13332-201ENSMUST00000120451 1398 ntBASIC18.62■□□□□ 0.57
Shtn1Q8K2Q9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shtn1Q8K2Q9 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Shtn1Q8K2Q9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Shtn1Q8K2Q9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shtn1Q8K2Q9 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shtn1Q8K2Q9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shtn1Q8K2Q9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shtn1Q8K2Q9 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Shtn1Q8K2Q9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shtn1Q8K2Q9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shtn1Q8K2Q9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shtn1Q8K2Q9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shtn1Q8K2Q9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shtn1Q8K2Q9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Shtn1Q8K2Q9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shtn1Q8K2Q9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shtn1Q8K2Q9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Shtn1Q8K2Q9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shtn1Q8K2Q9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shtn1Q8K2Q9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shtn1Q8K2Q9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.61■□□□□ 0.57
Shtn1Q8K2Q9 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.61■□□□□ 0.57
Shtn1Q8K2Q9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shtn1Q8K2Q9 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Shtn1Q8K2Q9 Wdyhv1-206ENSMUST00000227142 786 ntBASIC18.61■□□□□ 0.57
Shtn1Q8K2Q9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Shtn1Q8K2Q9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shtn1Q8K2Q9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shtn1Q8K2Q9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shtn1Q8K2Q9 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.6■□□□□ 0.57
Shtn1Q8K2Q9 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Shtn1Q8K2Q9 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shtn1Q8K2Q9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shtn1Q8K2Q9 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shtn1Q8K2Q9 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Shtn1Q8K2Q9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shtn1Q8K2Q9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Shtn1Q8K2Q9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shtn1Q8K2Q9 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.6■□□□□ 0.57
Shtn1Q8K2Q9 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC18.6■□□□□ 0.57
Shtn1Q8K2Q9 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.6■□□□□ 0.57
Shtn1Q8K2Q9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms