Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn1Q8K0T0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn1Q8K0T0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn1Q8K0T0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn1Q8K0T0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn1Q8K0T0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
Rtn1Q8K0T0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.29■□□□□ 0.52
Rtn1Q8K0T0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.29■□□□□ 0.52
Rtn1Q8K0T0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.29■□□□□ 0.52
Rtn1Q8K0T0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.29■□□□□ 0.52
Rtn1Q8K0T0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn1Q8K0T0 Dancr-204ENSMUST00000132389 2347 ntBASIC18.29■□□□□ 0.52
Rtn1Q8K0T0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn1Q8K0T0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn1Q8K0T0 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn1Q8K0T0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn1Q8K0T0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn1Q8K0T0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn1Q8K0T0 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn1Q8K0T0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn1Q8K0T0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn1Q8K0T0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn1Q8K0T0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn1Q8K0T0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn1Q8K0T0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn1Q8K0T0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.28■□□□□ 0.52
Rtn1Q8K0T0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn1Q8K0T0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn1Q8K0T0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn1Q8K0T0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn1Q8K0T0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn1Q8K0T0 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn1Q8K0T0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rtn1Q8K0T0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn1Q8K0T0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.28■□□□□ 0.52
Rtn1Q8K0T0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn1Q8K0T0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn1Q8K0T0 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn1Q8K0T0 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn1Q8K0T0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.27■□□□□ 0.52
Rtn1Q8K0T0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Rtn1Q8K0T0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.27■□□□□ 0.52
Rtn1Q8K0T0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn1Q8K0T0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn1Q8K0T0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.27■□□□□ 0.52
Rtn1Q8K0T0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Rtn1Q8K0T0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.27■□□□□ 0.52
Rtn1Q8K0T0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.27■□□□□ 0.52
Rtn1Q8K0T0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn1Q8K0T0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.27■□□□□ 0.52
Rtn1Q8K0T0 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn1Q8K0T0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Rtn1Q8K0T0 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Rtn1Q8K0T0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.27■□□□□ 0.51
Rtn1Q8K0T0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Rtn1Q8K0T0 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rtn1Q8K0T0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rtn1Q8K0T0 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Rtn1Q8K0T0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Gm8825-201ENSMUST00000182565 998 ntBASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Gm4518-201ENSMUST00000182638 718 ntBASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn1Q8K0T0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtn1Q8K0T0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtn1Q8K0T0 Gm4459-201ENSMUST00000118750 468 ntBASIC18.25■□□□□ 0.51
Rtn1Q8K0T0 Gm12497-201ENSMUST00000138778 237 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms