Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Syne4Q8CII8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Syne4Q8CII8 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.89■□□□□ 0.45
Syne4Q8CII8 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Syne4Q8CII8 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Syne4Q8CII8 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.89■□□□□ 0.45
Syne4Q8CII8 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Syne4Q8CII8 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
Syne4Q8CII8 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Syne4Q8CII8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Syne4Q8CII8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Syne4Q8CII8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Syne4Q8CII8 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Syne4Q8CII8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Syne4Q8CII8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Syne4Q8CII8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syne4Q8CII8 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.88■□□□□ 0.45
Syne4Q8CII8 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.88■□□□□ 0.45
Syne4Q8CII8 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.88■□□□□ 0.45
Syne4Q8CII8 Gm25948-201ENSMUST00000175334 112 ntBASIC17.88■□□□□ 0.45
Syne4Q8CII8 Mir7023-201ENSMUST00000185093 64 ntBASIC17.88■□□□□ 0.45
Syne4Q8CII8 Gm43474-201ENSMUST00000196415 774 ntBASIC17.88■□□□□ 0.45
Syne4Q8CII8 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.88■□□□□ 0.45
Syne4Q8CII8 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.88■□□□□ 0.45
Syne4Q8CII8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Syne4Q8CII8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syne4Q8CII8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Syne4Q8CII8 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Syne4Q8CII8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syne4Q8CII8 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syne4Q8CII8 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Syne4Q8CII8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syne4Q8CII8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syne4Q8CII8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Syne4Q8CII8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Syne4Q8CII8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Syne4Q8CII8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Syne4Q8CII8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.87■□□□□ 0.45
Syne4Q8CII8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Syne4Q8CII8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Syne4Q8CII8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Syne4Q8CII8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Syne4Q8CII8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Syne4Q8CII8 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Syne4Q8CII8 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Syne4Q8CII8 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Syne4Q8CII8 Rprl2-201ENSMUST00000157150 290 ntBASIC17.87■□□□□ 0.45
Syne4Q8CII8 Gm20553-201ENSMUST00000204205 844 ntBASIC17.87■□□□□ 0.45
Syne4Q8CII8 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.87■□□□□ 0.45
Syne4Q8CII8 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.87■□□□□ 0.45
Syne4Q8CII8 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.87■□□□□ 0.45
Syne4Q8CII8 Thap2-203ENSMUST00000218989 527 ntBASIC17.87■□□□□ 0.45
Syne4Q8CII8 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.87■□□□□ 0.45
Syne4Q8CII8 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Syne4Q8CII8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Syne4Q8CII8 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Syne4Q8CII8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Syne4Q8CII8 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.87■□□□□ 0.45
Syne4Q8CII8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Syne4Q8CII8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Syne4Q8CII8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Syne4Q8CII8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Syne4Q8CII8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.87■□□□□ 0.45
Syne4Q8CII8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Syne4Q8CII8 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Syne4Q8CII8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Syne4Q8CII8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Syne4Q8CII8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Syne4Q8CII8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Syne4Q8CII8 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Syne4Q8CII8 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Syne4Q8CII8 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Syne4Q8CII8 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Syne4Q8CII8 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.86■□□□□ 0.45
Syne4Q8CII8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Syne4Q8CII8 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Syne4Q8CII8 Gm18889-201ENSMUST00000174284 929 ntBASIC17.86■□□□□ 0.45
Syne4Q8CII8 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Syne4Q8CII8 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.86■□□□□ 0.45
Syne4Q8CII8 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.86■□□□□ 0.45
Syne4Q8CII8 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.86■□□□□ 0.45
Syne4Q8CII8 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Syne4Q8CII8 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Syne4Q8CII8 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Syne4Q8CII8 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Syne4Q8CII8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Syne4Q8CII8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Syne4Q8CII8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Syne4Q8CII8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Syne4Q8CII8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Syne4Q8CII8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Syne4Q8CII8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Syne4Q8CII8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.85■□□□□ 0.45
Syne4Q8CII8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Syne4Q8CII8 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Syne4Q8CII8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Syne4Q8CII8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Syne4Q8CII8 Gm18246-201ENSMUST00000221023 728 ntBASIC17.85■□□□□ 0.45
Syne4Q8CII8 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.85■□□□□ 0.45
Syne4Q8CII8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms