Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab11fip3Q8CHD8 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab11fip3Q8CHD8 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab11fip3Q8CHD8 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab11fip3Q8CHD8 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC20.47■□□□□ 0.87
Rab11fip3Q8CHD8 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Rab11fip3Q8CHD8 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab11fip3Q8CHD8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rab11fip3Q8CHD8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rab11fip3Q8CHD8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab11fip3Q8CHD8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Rab11fip3Q8CHD8 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.46■□□□□ 0.87
Rab11fip3Q8CHD8 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rab11fip3Q8CHD8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Rab11fip3Q8CHD8 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Rab11fip3Q8CHD8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC20.46■□□□□ 0.87
Rab11fip3Q8CHD8 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rab11fip3Q8CHD8 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rab11fip3Q8CHD8 Gm11185-201ENSMUST00000117732 1007 ntBASIC20.46■□□□□ 0.87
Rab11fip3Q8CHD8 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Rab11fip3Q8CHD8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Rab11fip3Q8CHD8 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rab11fip3Q8CHD8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rab11fip3Q8CHD8 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC20.46■□□□□ 0.87
Rab11fip3Q8CHD8 AC158538.2-201ENSMUST00000225455 906 ntBASIC20.46■□□□□ 0.87
Rab11fip3Q8CHD8 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rab11fip3Q8CHD8 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rab11fip3Q8CHD8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rab11fip3Q8CHD8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rab11fip3Q8CHD8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Rab11fip3Q8CHD8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rab11fip3Q8CHD8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC20.45■□□□□ 0.87
Rab11fip3Q8CHD8 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rab11fip3Q8CHD8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rab11fip3Q8CHD8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rab11fip3Q8CHD8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Rab11fip3Q8CHD8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rab11fip3Q8CHD8 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Rab11fip3Q8CHD8 Gm12260-201ENSMUST00000122447 411 ntBASIC20.45■□□□□ 0.86
Rab11fip3Q8CHD8 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC20.45■□□□□ 0.86
Rab11fip3Q8CHD8 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rab11fip3Q8CHD8 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC20.45■□□□□ 0.86
Rab11fip3Q8CHD8 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC20.45■□□□□ 0.86
Rab11fip3Q8CHD8 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC20.45■□□□□ 0.86
Rab11fip3Q8CHD8 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC20.45■□□□□ 0.86
Rab11fip3Q8CHD8 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC20.45■□□□□ 0.86
Rab11fip3Q8CHD8 Gm7787-201ENSMUST00000216858 688 ntBASIC20.45■□□□□ 0.86
Rab11fip3Q8CHD8 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Rab11fip3Q8CHD8 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Rab11fip3Q8CHD8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rab11fip3Q8CHD8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rab11fip3Q8CHD8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rab11fip3Q8CHD8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rab11fip3Q8CHD8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rab11fip3Q8CHD8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rab11fip3Q8CHD8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rab11fip3Q8CHD8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rab11fip3Q8CHD8 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rab11fip3Q8CHD8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC20.44■□□□□ 0.86
Rab11fip3Q8CHD8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rab11fip3Q8CHD8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rab11fip3Q8CHD8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rab11fip3Q8CHD8 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rab11fip3Q8CHD8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rab11fip3Q8CHD8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rab11fip3Q8CHD8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rab11fip3Q8CHD8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rab11fip3Q8CHD8 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Rab11fip3Q8CHD8 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC20.44■□□□□ 0.86
Rab11fip3Q8CHD8 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC20.44■□□□□ 0.86
Rab11fip3Q8CHD8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC20.44■□□□□ 0.86
Rab11fip3Q8CHD8 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rab11fip3Q8CHD8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC20.44■□□□□ 0.86
Rab11fip3Q8CHD8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC20.44■□□□□ 0.86
Rab11fip3Q8CHD8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rab11fip3Q8CHD8 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rab11fip3Q8CHD8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC20.44■□□□□ 0.86
Rab11fip3Q8CHD8 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab11fip3Q8CHD8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Rab11fip3Q8CHD8 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab11fip3Q8CHD8 Gm37166-201ENSMUST00000195473 2474 ntBASIC20.43■□□□□ 0.86
Rab11fip3Q8CHD8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Rab11fip3Q8CHD8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab11fip3Q8CHD8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab11fip3Q8CHD8 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rab11fip3Q8CHD8 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab11fip3Q8CHD8 AC131709.1-201ENSMUST00000224731 1180 ntBASIC20.43■□□□□ 0.86
Rab11fip3Q8CHD8 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Rab11fip3Q8CHD8 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab11fip3Q8CHD8 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab11fip3Q8CHD8 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rab11fip3Q8CHD8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rab11fip3Q8CHD8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab11fip3Q8CHD8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC20.43■□□□□ 0.86
Rab11fip3Q8CHD8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab11fip3Q8CHD8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab11fip3Q8CHD8 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab11fip3Q8CHD8 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC20.43■□□□□ 0.86
Rab11fip3Q8CHD8 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab11fip3Q8CHD8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms