Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc4Q8CG47 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc4Q8CG47 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc4Q8CG47 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.49■□□□□ 0.71
Smc4Q8CG47 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc4Q8CG47 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smc4Q8CG47 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc4Q8CG47 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Smc4Q8CG47 Gm13036-201ENSMUST00000117799 748 ntBASIC19.49■□□□□ 0.71
Smc4Q8CG47 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc4Q8CG47 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC19.49■□□□□ 0.71
Smc4Q8CG47 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc4Q8CG47 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Smc4Q8CG47 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC19.49■□□□□ 0.71
Smc4Q8CG47 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC19.49■□□□□ 0.71
Smc4Q8CG47 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc4Q8CG47 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc4Q8CG47 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc4Q8CG47 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smc4Q8CG47 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc4Q8CG47 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc4Q8CG47 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc4Q8CG47 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.48■□□□□ 0.71
Smc4Q8CG47 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc4Q8CG47 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc4Q8CG47 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc4Q8CG47 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Smc4Q8CG47 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC19.48■□□□□ 0.71
Smc4Q8CG47 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc4Q8CG47 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc4Q8CG47 Gm11764-201ENSMUST00000120221 623 ntBASIC19.48■□□□□ 0.71
Smc4Q8CG47 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.48■□□□□ 0.71
Smc4Q8CG47 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc4Q8CG47 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC19.48■□□□□ 0.71
Smc4Q8CG47 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc4Q8CG47 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Smc4Q8CG47 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc4Q8CG47 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Smc4Q8CG47 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc4Q8CG47 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc4Q8CG47 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.48■□□□□ 0.71
Smc4Q8CG47 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.48■□□□□ 0.71
Smc4Q8CG47 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc4Q8CG47 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smc4Q8CG47 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.47■□□□□ 0.71
Smc4Q8CG47 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc4Q8CG47 Gm15358-201ENSMUST00000119249 520 ntBASIC19.47■□□□□ 0.71
Smc4Q8CG47 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC19.47■□□□□ 0.71
Smc4Q8CG47 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC19.47■□□□□ 0.71
Smc4Q8CG47 Gm5364-201ENSMUST00000216789 889 ntBASIC19.47■□□□□ 0.71
Smc4Q8CG47 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC19.47■□□□□ 0.71
Smc4Q8CG47 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc4Q8CG47 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc4Q8CG47 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smc4Q8CG47 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc4Q8CG47 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc4Q8CG47 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc4Q8CG47 Zkscan3-208ENSMUST00000224820 5398 ntBASIC19.47■□□□□ 0.71
Smc4Q8CG47 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc4Q8CG47 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc4Q8CG47 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smc4Q8CG47 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC19.47■□□□□ 0.71
Smc4Q8CG47 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc4Q8CG47 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Smc4Q8CG47 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc4Q8CG47 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc4Q8CG47 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smc4Q8CG47 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc4Q8CG47 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smc4Q8CG47 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc4Q8CG47 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc4Q8CG47 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc4Q8CG47 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc4Q8CG47 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc4Q8CG47 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc4Q8CG47 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Smc4Q8CG47 Psmb5-202ENSMUST00000227257 622 ntBASIC19.46■□□□□ 0.71
Smc4Q8CG47 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc4Q8CG47 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc4Q8CG47 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc4Q8CG47 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smc4Q8CG47 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc4Q8CG47 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Smc4Q8CG47 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smc4Q8CG47 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc4Q8CG47 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.45■□□□□ 0.7
Smc4Q8CG47 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smc4Q8CG47 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc4Q8CG47 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc4Q8CG47 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smc4Q8CG47 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc4Q8CG47 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc4Q8CG47 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.45■□□□□ 0.7
Smc4Q8CG47 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
Smc4Q8CG47 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC19.45■□□□□ 0.7
Smc4Q8CG47 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.45■□□□□ 0.7
Smc4Q8CG47 AC093926.2-201ENSMUST00000214468 1228 ntBASIC19.45■□□□□ 0.7
Smc4Q8CG47 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc4Q8CG47 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc4Q8CG47 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms