Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc5Q8CG46 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc5Q8CG46 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smc5Q8CG46 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smc5Q8CG46 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc5Q8CG46 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc5Q8CG46 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Smc5Q8CG46 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc5Q8CG46 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc5Q8CG46 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc5Q8CG46 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smc5Q8CG46 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smc5Q8CG46 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC19.61■□□□□ 0.73
Smc5Q8CG46 Gm15565-201ENSMUST00000118890 427 ntBASIC19.61■□□□□ 0.73
Smc5Q8CG46 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smc5Q8CG46 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc5Q8CG46 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Smc5Q8CG46 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc5Q8CG46 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc5Q8CG46 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc5Q8CG46 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Smc5Q8CG46 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc5Q8CG46 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc5Q8CG46 Gm7669-201ENSMUST00000210184 1603 ntBASIC19.61■□□□□ 0.73
Smc5Q8CG46 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc5Q8CG46 Gm11839-201ENSMUST00000120647 1953 ntBASIC19.61■□□□□ 0.73
Smc5Q8CG46 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc5Q8CG46 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Smc5Q8CG46 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Smc5Q8CG46 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC19.6■□□□□ 0.73
Smc5Q8CG46 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc5Q8CG46 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smc5Q8CG46 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Smc5Q8CG46 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.6■□□□□ 0.73
Smc5Q8CG46 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc5Q8CG46 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc5Q8CG46 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smc5Q8CG46 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc5Q8CG46 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc5Q8CG46 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Smc5Q8CG46 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc5Q8CG46 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc5Q8CG46 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc5Q8CG46 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc5Q8CG46 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc5Q8CG46 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc5Q8CG46 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc5Q8CG46 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc5Q8CG46 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc5Q8CG46 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc5Q8CG46 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smc5Q8CG46 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc5Q8CG46 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Smc5Q8CG46 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.59■□□□□ 0.73
Smc5Q8CG46 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc5Q8CG46 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Smc5Q8CG46 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc5Q8CG46 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc5Q8CG46 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc5Q8CG46 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc5Q8CG46 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc5Q8CG46 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Smc5Q8CG46 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smc5Q8CG46 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Smc5Q8CG46 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Smc5Q8CG46 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Smc5Q8CG46 Gm18101-201ENSMUST00000215769 548 ntBASIC19.58■□□□□ 0.72
Smc5Q8CG46 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smc5Q8CG46 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smc5Q8CG46 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smc5Q8CG46 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smc5Q8CG46 Gm8784-201ENSMUST00000222096 1435 ntBASIC19.58■□□□□ 0.72
Smc5Q8CG46 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smc5Q8CG46 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smc5Q8CG46 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smc5Q8CG46 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc5Q8CG46 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc5Q8CG46 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc5Q8CG46 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc5Q8CG46 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc5Q8CG46 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smc5Q8CG46 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Smc5Q8CG46 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.57■□□□□ 0.72
Smc5Q8CG46 Gm9987-201ENSMUST00000069768 567 ntBASIC19.57■□□□□ 0.72
Smc5Q8CG46 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smc5Q8CG46 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smc5Q8CG46 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc5Q8CG46 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc5Q8CG46 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smc5Q8CG46 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc5Q8CG46 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc5Q8CG46 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smc5Q8CG46 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Smc5Q8CG46 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Smc5Q8CG46 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Smc5Q8CG46 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Smc5Q8CG46 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Smc5Q8CG46 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smc5Q8CG46 Gm6433-201ENSMUST00000118634 875 ntBASIC19.56■□□□□ 0.72
Smc5Q8CG46 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms