Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc28bQ8CEG5 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc28bQ8CEG5 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc28bQ8CEG5 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ccdc28bQ8CEG5 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ccdc28bQ8CEG5 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc28bQ8CEG5 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc28bQ8CEG5 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc28bQ8CEG5 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc28bQ8CEG5 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc28bQ8CEG5 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc28bQ8CEG5 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.69■□□□□ 0.1
Ccdc28bQ8CEG5 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc28bQ8CEG5 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc28bQ8CEG5 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc28bQ8CEG5 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Mir1199-201ENSMUST00000117015 119 ntBASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Odf3b-204ENSMUST00000227834 930 ntBASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc28bQ8CEG5 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 Gm11539-201ENSMUST00000119837 557 ntBASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc28bQ8CEG5 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc28bQ8CEG5 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc28bQ8CEG5 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc28bQ8CEG5 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc28bQ8CEG5 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc28bQ8CEG5 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.66■□□□□ 0.1
Ccdc28bQ8CEG5 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc28bQ8CEG5 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.66■□□□□ 0.1
Ccdc28bQ8CEG5 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc28bQ8CEG5 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc28bQ8CEG5 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc28bQ8CEG5 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc28bQ8CEG5 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc28bQ8CEG5 Gm12134-201ENSMUST00000122109 520 ntBASIC15.66■□□□□ 0.1
Ccdc28bQ8CEG5 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.66■□□□□ 0.1
Ccdc28bQ8CEG5 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc28bQ8CEG5 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.66■□□□□ 0.1
Ccdc28bQ8CEG5 Gm18421-201ENSMUST00000204122 625 ntBASIC15.66■□□□□ 0.1
Ccdc28bQ8CEG5 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.66■□□□□ 0.1
Ccdc28bQ8CEG5 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms