Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb7Q8CDY9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.96■□□□□ 0.15
Pcdhb7Q8CDY9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb7Q8CDY9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb7Q8CDY9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb7Q8CDY9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.96■□□□□ 0.15
Pcdhb7Q8CDY9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb7Q8CDY9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb7Q8CDY9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb7Q8CDY9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb7Q8CDY9 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb7Q8CDY9 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.96■□□□□ 0.15
Pcdhb7Q8CDY9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.96■□□□□ 0.15
Pcdhb7Q8CDY9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.96■□□□□ 0.15
Pcdhb7Q8CDY9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Pcdhb7Q8CDY9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb7Q8CDY9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb7Q8CDY9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Pcdhb7Q8CDY9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb7Q8CDY9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb7Q8CDY9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb7Q8CDY9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb7Q8CDY9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhb7Q8CDY9 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhb7Q8CDY9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.96■□□□□ 0.14
Pcdhb7Q8CDY9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhb7Q8CDY9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Pcdhb7Q8CDY9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.95■□□□□ 0.14
Pcdhb7Q8CDY9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdhb7Q8CDY9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb7Q8CDY9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Pcdhb7Q8CDY9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdhb7Q8CDY9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb7Q8CDY9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb7Q8CDY9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb7Q8CDY9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb7Q8CDY9 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Pcdhb7Q8CDY9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb7Q8CDY9 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb7Q8CDY9 AA414768-201ENSMUST00000121924 1257 ntBASIC15.95■□□□□ 0.14
Pcdhb7Q8CDY9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdhb7Q8CDY9 Gm10052-201ENSMUST00000168019 960 ntBASIC15.95■□□□□ 0.14
Pcdhb7Q8CDY9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb7Q8CDY9 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb7Q8CDY9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb7Q8CDY9 Gm7729-201ENSMUST00000050143 801 ntBASIC15.95■□□□□ 0.14
Pcdhb7Q8CDY9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb7Q8CDY9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb7Q8CDY9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb7Q8CDY9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb7Q8CDY9 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb7Q8CDY9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb7Q8CDY9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb7Q8CDY9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb7Q8CDY9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb7Q8CDY9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Pcdhb7Q8CDY9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Pcdhb7Q8CDY9 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb7Q8CDY9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb7Q8CDY9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
Pcdhb7Q8CDY9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb7Q8CDY9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb7Q8CDY9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb7Q8CDY9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Pcdhb7Q8CDY9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb7Q8CDY9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb7Q8CDY9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Pcdhb7Q8CDY9 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb7Q8CDY9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Pcdhb7Q8CDY9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb7Q8CDY9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb7Q8CDY9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb7Q8CDY9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb7Q8CDY9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb7Q8CDY9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms