Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Vcpip1Q8CDG3 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vcpip1Q8CDG3 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Vcpip1Q8CDG3 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vcpip1Q8CDG3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
Vcpip1Q8CDG3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vcpip1Q8CDG3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vcpip1Q8CDG3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vcpip1Q8CDG3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vcpip1Q8CDG3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vcpip1Q8CDG3 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vcpip1Q8CDG3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vcpip1Q8CDG3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vcpip1Q8CDG3 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vcpip1Q8CDG3 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Vcpip1Q8CDG3 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vcpip1Q8CDG3 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vcpip1Q8CDG3 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vcpip1Q8CDG3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Vcpip1Q8CDG3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Vcpip1Q8CDG3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vcpip1Q8CDG3 Gm9013-201ENSMUST00000132939 882 ntBASIC17.06■□□□□ 0.32
Vcpip1Q8CDG3 Gm44430-201ENSMUST00000203376 995 ntBASIC17.06■□□□□ 0.32
Vcpip1Q8CDG3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vcpip1Q8CDG3 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Vcpip1Q8CDG3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Vcpip1Q8CDG3 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vcpip1Q8CDG3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vcpip1Q8CDG3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Vcpip1Q8CDG3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Vcpip1Q8CDG3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.06■□□□□ 0.32
Vcpip1Q8CDG3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.05■□□□□ 0.32
Vcpip1Q8CDG3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vcpip1Q8CDG3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vcpip1Q8CDG3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vcpip1Q8CDG3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vcpip1Q8CDG3 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vcpip1Q8CDG3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vcpip1Q8CDG3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vcpip1Q8CDG3 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vcpip1Q8CDG3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Vcpip1Q8CDG3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vcpip1Q8CDG3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vcpip1Q8CDG3 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Vcpip1Q8CDG3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vcpip1Q8CDG3 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vcpip1Q8CDG3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Vcpip1Q8CDG3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vcpip1Q8CDG3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Vcpip1Q8CDG3 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vcpip1Q8CDG3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.04■□□□□ 0.32
Vcpip1Q8CDG3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Vcpip1Q8CDG3 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vcpip1Q8CDG3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Vcpip1Q8CDG3 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vcpip1Q8CDG3 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vcpip1Q8CDG3 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vcpip1Q8CDG3 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Vcpip1Q8CDG3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vcpip1Q8CDG3 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vcpip1Q8CDG3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vcpip1Q8CDG3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.03■□□□□ 0.32
Vcpip1Q8CDG3 Gm10052-201ENSMUST00000168019 960 ntBASIC17.03■□□□□ 0.32
Vcpip1Q8CDG3 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.03■□□□□ 0.32
Vcpip1Q8CDG3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.03■□□□□ 0.32
Vcpip1Q8CDG3 Gm7729-201ENSMUST00000050143 801 ntBASIC17.03■□□□□ 0.32
Vcpip1Q8CDG3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Vcpip1Q8CDG3 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vcpip1Q8CDG3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.03■□□□□ 0.32
Vcpip1Q8CDG3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms