Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.63■□□□□ 0.57
E4f1Q8CCE9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
E4f1Q8CCE9 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
E4f1Q8CCE9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
E4f1Q8CCE9 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
E4f1Q8CCE9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.63■□□□□ 0.57
E4f1Q8CCE9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.63■□□□□ 0.57
E4f1Q8CCE9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
E4f1Q8CCE9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
E4f1Q8CCE9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
E4f1Q8CCE9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
E4f1Q8CCE9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
E4f1Q8CCE9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
E4f1Q8CCE9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
E4f1Q8CCE9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
E4f1Q8CCE9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
E4f1Q8CCE9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
E4f1Q8CCE9 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
E4f1Q8CCE9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
E4f1Q8CCE9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
E4f1Q8CCE9 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
E4f1Q8CCE9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
E4f1Q8CCE9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.63■□□□□ 0.57
E4f1Q8CCE9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
E4f1Q8CCE9 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
E4f1Q8CCE9 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
E4f1Q8CCE9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
E4f1Q8CCE9 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
E4f1Q8CCE9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
E4f1Q8CCE9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
E4f1Q8CCE9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
E4f1Q8CCE9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.62■□□□□ 0.57
E4f1Q8CCE9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
E4f1Q8CCE9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.62■□□□□ 0.57
E4f1Q8CCE9 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.62■□□□□ 0.57
E4f1Q8CCE9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
E4f1Q8CCE9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
E4f1Q8CCE9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
E4f1Q8CCE9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
E4f1Q8CCE9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
E4f1Q8CCE9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
E4f1Q8CCE9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
E4f1Q8CCE9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC18.61■□□□□ 0.57
E4f1Q8CCE9 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
E4f1Q8CCE9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
E4f1Q8CCE9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
E4f1Q8CCE9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
E4f1Q8CCE9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.61■□□□□ 0.57
E4f1Q8CCE9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
E4f1Q8CCE9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
E4f1Q8CCE9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
E4f1Q8CCE9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
E4f1Q8CCE9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
E4f1Q8CCE9 Gm12350-201ENSMUST00000121208 462 ntBASIC18.61■□□□□ 0.57
E4f1Q8CCE9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
E4f1Q8CCE9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.61■□□□□ 0.57
E4f1Q8CCE9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
E4f1Q8CCE9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
E4f1Q8CCE9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
E4f1Q8CCE9 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
E4f1Q8CCE9 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
E4f1Q8CCE9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
E4f1Q8CCE9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
E4f1Q8CCE9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
E4f1Q8CCE9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
E4f1Q8CCE9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
E4f1Q8CCE9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
E4f1Q8CCE9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
E4f1Q8CCE9 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.6■□□□□ 0.57
E4f1Q8CCE9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
E4f1Q8CCE9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
E4f1Q8CCE9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
E4f1Q8CCE9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
E4f1Q8CCE9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
E4f1Q8CCE9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
E4f1Q8CCE9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
E4f1Q8CCE9 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.6■□□□□ 0.57
E4f1Q8CCE9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
E4f1Q8CCE9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
E4f1Q8CCE9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
E4f1Q8CCE9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
E4f1Q8CCE9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
E4f1Q8CCE9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
E4f1Q8CCE9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
E4f1Q8CCE9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
E4f1Q8CCE9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
E4f1Q8CCE9 Gm25745-201ENSMUST00000174945 133 ntBASIC18.59■□□□□ 0.57
E4f1Q8CCE9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.59■□□□□ 0.57
E4f1Q8CCE9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.59■□□□□ 0.57
E4f1Q8CCE9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.59■□□□□ 0.57
E4f1Q8CCE9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
E4f1Q8CCE9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
E4f1Q8CCE9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
E4f1Q8CCE9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
E4f1Q8CCE9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
E4f1Q8CCE9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
E4f1Q8CCE9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
E4f1Q8CCE9 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
E4f1Q8CCE9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
E4f1Q8CCE9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms