Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Alx1Q8C8B0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.47■□□□□ 0.55
Alx1Q8C8B0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Alx1Q8C8B0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Alx1Q8C8B0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Alx1Q8C8B0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Alx1Q8C8B0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Alx1Q8C8B0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Alx1Q8C8B0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Alx1Q8C8B0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Alx1Q8C8B0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.46■□□□□ 0.55
Alx1Q8C8B0 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Alx1Q8C8B0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.46■□□□□ 0.55
Alx1Q8C8B0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.46■□□□□ 0.55
Alx1Q8C8B0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Alx1Q8C8B0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Alx1Q8C8B0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Alx1Q8C8B0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.46■□□□□ 0.55
Alx1Q8C8B0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Alx1Q8C8B0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Alx1Q8C8B0 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.46■□□□□ 0.55
Alx1Q8C8B0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Alx1Q8C8B0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Alx1Q8C8B0 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Alx1Q8C8B0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Alx1Q8C8B0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Alx1Q8C8B0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.46■□□□□ 0.54
Alx1Q8C8B0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Gm6550-201ENSMUST00000187574 993 ntBASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Alx1Q8C8B0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Alx1Q8C8B0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Alx1Q8C8B0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Alx1Q8C8B0 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.44■□□□□ 0.54
Alx1Q8C8B0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.44■□□□□ 0.54
Alx1Q8C8B0 Gm14722-201ENSMUST00000118943 689 ntBASIC18.44■□□□□ 0.54
Alx1Q8C8B0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Alx1Q8C8B0 Gm5682-201ENSMUST00000173402 505 ntBASIC18.44■□□□□ 0.54
Alx1Q8C8B0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Alx1Q8C8B0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Alx1Q8C8B0 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.44■□□□□ 0.54
Alx1Q8C8B0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Alx1Q8C8B0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Alx1Q8C8B0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Alx1Q8C8B0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Alx1Q8C8B0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Alx1Q8C8B0 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Alx1Q8C8B0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Alx1Q8C8B0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Alx1Q8C8B0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Alx1Q8C8B0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Alx1Q8C8B0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Alx1Q8C8B0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Alx1Q8C8B0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Alx1Q8C8B0 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Alx1Q8C8B0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Alx1Q8C8B0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Alx1Q8C8B0 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Alx1Q8C8B0 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Alx1Q8C8B0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Alx1Q8C8B0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Alx1Q8C8B0 Gm7222-201ENSMUST00000117512 906 ntBASIC18.43■□□□□ 0.54
Alx1Q8C8B0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Alx1Q8C8B0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Alx1Q8C8B0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Alx1Q8C8B0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.43■□□□□ 0.54
Alx1Q8C8B0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
Alx1Q8C8B0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.43■□□□□ 0.54
Alx1Q8C8B0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Alx1Q8C8B0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Alx1Q8C8B0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms