Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.5■□□□□ 0.39
Trim9Q8C7M3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Trim9Q8C7M3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
Trim9Q8C7M3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim9Q8C7M3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim9Q8C7M3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim9Q8C7M3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim9Q8C7M3 Gm15165-201ENSMUST00000118140 502 ntBASIC17.49■□□□□ 0.39
Trim9Q8C7M3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim9Q8C7M3 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.49■□□□□ 0.39
Trim9Q8C7M3 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.49■□□□□ 0.39
Trim9Q8C7M3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim9Q8C7M3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim9Q8C7M3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim9Q8C7M3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.49■□□□□ 0.39
Trim9Q8C7M3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim9Q8C7M3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim9Q8C7M3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim9Q8C7M3 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trim9Q8C7M3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim9Q8C7M3 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim9Q8C7M3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim9Q8C7M3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim9Q8C7M3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim9Q8C7M3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim9Q8C7M3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.48■□□□□ 0.39
Trim9Q8C7M3 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim9Q8C7M3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim9Q8C7M3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trim9Q8C7M3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim9Q8C7M3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim9Q8C7M3 Gm15372-201ENSMUST00000120729 834 ntBASIC17.48■□□□□ 0.39
Trim9Q8C7M3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim9Q8C7M3 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trim9Q8C7M3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim9Q8C7M3 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim9Q8C7M3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim9Q8C7M3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim9Q8C7M3 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim9Q8C7M3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim9Q8C7M3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim9Q8C7M3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim9Q8C7M3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim9Q8C7M3 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim9Q8C7M3 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim9Q8C7M3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trim9Q8C7M3 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim9Q8C7M3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim9Q8C7M3 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim9Q8C7M3 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.47■□□□□ 0.39
Trim9Q8C7M3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim9Q8C7M3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim9Q8C7M3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trim9Q8C7M3 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim9Q8C7M3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim9Q8C7M3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim9Q8C7M3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim9Q8C7M3 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trim9Q8C7M3 Gm27867-201ENSMUST00000184778 125 ntBASIC17.47■□□□□ 0.39
Trim9Q8C7M3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim9Q8C7M3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim9Q8C7M3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trim9Q8C7M3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim9Q8C7M3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim9Q8C7M3 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.47■□□□□ 0.39
Trim9Q8C7M3 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim9Q8C7M3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trim9Q8C7M3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.46■□□□□ 0.39
Trim9Q8C7M3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.46■□□□□ 0.39
Trim9Q8C7M3 Gm9172-201ENSMUST00000212092 954 ntBASIC17.46■□□□□ 0.39
Trim9Q8C7M3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim9Q8C7M3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim9Q8C7M3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim9Q8C7M3 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim9Q8C7M3 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim9Q8C7M3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim9Q8C7M3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim9Q8C7M3 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trim9Q8C7M3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim9Q8C7M3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Trim9Q8C7M3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Trim9Q8C7M3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim9Q8C7M3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim9Q8C7M3 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trim9Q8C7M3 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim9Q8C7M3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim9Q8C7M3 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Trim9Q8C7M3 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim9Q8C7M3 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
Trim9Q8C7M3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.45■□□□□ 0.38
Trim9Q8C7M3 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim9Q8C7M3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.45■□□□□ 0.38
Trim9Q8C7M3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.45■□□□□ 0.38
Trim9Q8C7M3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim9Q8C7M3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim9Q8C7M3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim9Q8C7M3 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim9Q8C7M3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim9Q8C7M3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim9Q8C7M3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms