Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Ccdc60Q8C4J0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc60Q8C4J0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc60Q8C4J0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc60Q8C4J0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC20.21■□□□□ 0.83
Ccdc60Q8C4J0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Ccdc60Q8C4J0 Gm27459-201ENSMUST00000184860 107 ntBASIC20.21■□□□□ 0.83
Ccdc60Q8C4J0 Gm43347-201ENSMUST00000200226 580 ntBASIC20.21■□□□□ 0.83
Ccdc60Q8C4J0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ccdc60Q8C4J0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc60Q8C4J0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc60Q8C4J0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc60Q8C4J0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc60Q8C4J0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc60Q8C4J0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ccdc60Q8C4J0 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc60Q8C4J0 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc60Q8C4J0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc60Q8C4J0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Ccdc60Q8C4J0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Ccdc60Q8C4J0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc60Q8C4J0 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc60Q8C4J0 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC20.21■□□□□ 0.83
Ccdc60Q8C4J0 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Gm4609-201ENSMUST00000106443 1002 ntBASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Gm5138-201ENSMUST00000113842 1002 ntBASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Gm15191-201ENSMUST00000117933 1000 ntBASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Gm12182-201ENSMUST00000118655 1008 ntBASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Gm13882-201ENSMUST00000120886 1002 ntBASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Gm10284-201ENSMUST00000145057 1005 ntBASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Gm10481-201ENSMUST00000179228 1002 ntBASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Gm2574-201ENSMUST00000181051 1002 ntBASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Gm3200-201ENSMUST00000181493 1002 ntBASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Gm8825-201ENSMUST00000182565 998 ntBASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Gm4518-201ENSMUST00000182638 718 ntBASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Gm8330-201ENSMUST00000182754 1008 ntBASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Gm4575-201ENSMUST00000182991 1002 ntBASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Gm8709-201ENSMUST00000183230 1012 ntBASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Gm10293-201ENSMUST00000076317 1002 ntBASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Gm6316-201ENSMUST00000082064 1020 ntBASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc60Q8C4J0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc60Q8C4J0 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc60Q8C4J0 Gm8784-201ENSMUST00000222096 1435 ntBASIC20.19■□□□□ 0.82
Ccdc60Q8C4J0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc60Q8C4J0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc60Q8C4J0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc60Q8C4J0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc60Q8C4J0 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc60Q8C4J0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc60Q8C4J0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Ccdc60Q8C4J0 Gm12497-201ENSMUST00000138778 237 ntBASIC20.19■□□□□ 0.82
Ccdc60Q8C4J0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC20.19■□□□□ 0.82
Ccdc60Q8C4J0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc60Q8C4J0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc60Q8C4J0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc60Q8C4J0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc60Q8C4J0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc60Q8C4J0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc60Q8C4J0 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc60Q8C4J0 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc60Q8C4J0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc60Q8C4J0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc60Q8C4J0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Ccdc60Q8C4J0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Ccdc60Q8C4J0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc60Q8C4J0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc60Q8C4J0 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Ccdc60Q8C4J0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc60Q8C4J0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC20.18■□□□□ 0.82
Ccdc60Q8C4J0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc60Q8C4J0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc60Q8C4J0 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc60Q8C4J0 Dancr-204ENSMUST00000132389 2347 ntBASIC20.18■□□□□ 0.82
Ccdc60Q8C4J0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Ccdc60Q8C4J0 Gm7153-201ENSMUST00000117092 455 ntBASIC20.18■□□□□ 0.82
Ccdc60Q8C4J0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc60Q8C4J0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC20.18■□□□□ 0.82
Ccdc60Q8C4J0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc60Q8C4J0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ccdc60Q8C4J0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms