Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim47Q8C0E3 Gm6257-201ENSMUST00000163864 910 ntBASIC17.55■□□□□ 0.4
Trim47Q8C0E3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim47Q8C0E3 Mir5131-201ENSMUST00000175426 93 ntBASIC17.55■□□□□ 0.4
Trim47Q8C0E3 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim47Q8C0E3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim47Q8C0E3 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim47Q8C0E3 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim47Q8C0E3 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim47Q8C0E3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim47Q8C0E3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Trim47Q8C0E3 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim47Q8C0E3 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim47Q8C0E3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim47Q8C0E3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim47Q8C0E3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim47Q8C0E3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trim47Q8C0E3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim47Q8C0E3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim47Q8C0E3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.54■□□□□ 0.4
Trim47Q8C0E3 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim47Q8C0E3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim47Q8C0E3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim47Q8C0E3 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim47Q8C0E3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim47Q8C0E3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim47Q8C0E3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim47Q8C0E3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
Trim47Q8C0E3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.54■□□□□ 0.4
Trim47Q8C0E3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim47Q8C0E3 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim47Q8C0E3 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Trim47Q8C0E3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.54■□□□□ 0.4
Trim47Q8C0E3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim47Q8C0E3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim47Q8C0E3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim47Q8C0E3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim47Q8C0E3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim47Q8C0E3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim47Q8C0E3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim47Q8C0E3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim47Q8C0E3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim47Q8C0E3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
Trim47Q8C0E3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim47Q8C0E3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim47Q8C0E3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim47Q8C0E3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.53■□□□□ 0.4
Trim47Q8C0E3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.53■□□□□ 0.4
Trim47Q8C0E3 Gm18733-201ENSMUST00000173950 856 ntBASIC17.53■□□□□ 0.4
Trim47Q8C0E3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.53■□□□□ 0.4
Trim47Q8C0E3 Gm2651-201ENSMUST00000203560 838 ntBASIC17.53■□□□□ 0.4
Trim47Q8C0E3 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trim47Q8C0E3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.53■□□□□ 0.4
Trim47Q8C0E3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.53■□□□□ 0.4
Trim47Q8C0E3 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim47Q8C0E3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.53■□□□□ 0.4
Trim47Q8C0E3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim47Q8C0E3 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim47Q8C0E3 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim47Q8C0E3 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trim47Q8C0E3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim47Q8C0E3 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim47Q8C0E3 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim47Q8C0E3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim47Q8C0E3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trim47Q8C0E3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim47Q8C0E3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Trim47Q8C0E3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim47Q8C0E3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim47Q8C0E3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trim47Q8C0E3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim47Q8C0E3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim47Q8C0E3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim47Q8C0E3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.52■□□□□ 0.4
Trim47Q8C0E3 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim47Q8C0E3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim47Q8C0E3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.52■□□□□ 0.4
Trim47Q8C0E3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim47Q8C0E3 Gm7230-201ENSMUST00000173026 815 ntBASIC17.52■□□□□ 0.4
Trim47Q8C0E3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim47Q8C0E3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.52■□□□□ 0.4
Trim47Q8C0E3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim47Q8C0E3 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim47Q8C0E3 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.52■□□□□ 0.4
Trim47Q8C0E3 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim47Q8C0E3 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trim47Q8C0E3 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim47Q8C0E3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim47Q8C0E3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim47Q8C0E3 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim47Q8C0E3 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim47Q8C0E3 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim47Q8C0E3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Trim47Q8C0E3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim47Q8C0E3 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trim47Q8C0E3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim47Q8C0E3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim47Q8C0E3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim47Q8C0E3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim47Q8C0E3 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms