Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk5rap1Q8BTW8 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk5rap1Q8BTW8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdk5rap1Q8BTW8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cdk5rap1Q8BTW8 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdk5rap1Q8BTW8 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cdk5rap1Q8BTW8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cdk5rap1Q8BTW8 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdk5rap1Q8BTW8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Cdk5rap1Q8BTW8 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.02■□□□□ -0
Cdk5rap1Q8BTW8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdk5rap1Q8BTW8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdk5rap1Q8BTW8 Gm8344-201ENSMUST00000119813 856 ntBASIC15.02■□□□□ -0
Cdk5rap1Q8BTW8 Gm1401-201ENSMUST00000122048 772 ntBASIC15.02■□□□□ -0
Cdk5rap1Q8BTW8 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.02■□□□□ -0
Cdk5rap1Q8BTW8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdk5rap1Q8BTW8 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdk5rap1Q8BTW8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cdk5rap1Q8BTW8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdk5rap1Q8BTW8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdk5rap1Q8BTW8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cdk5rap1Q8BTW8 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdk5rap1Q8BTW8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdk5rap1Q8BTW8 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cdk5rap1Q8BTW8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cdk5rap1Q8BTW8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdk5rap1Q8BTW8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk5rap1Q8BTW8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk5rap1Q8BTW8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk5rap1Q8BTW8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk5rap1Q8BTW8 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cdk5rap1Q8BTW8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk5rap1Q8BTW8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk5rap1Q8BTW8 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.01□□□□□ -0.01
Cdk5rap1Q8BTW8 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.01□□□□□ -0.01
Cdk5rap1Q8BTW8 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk5rap1Q8BTW8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.01□□□□□ -0.01
Cdk5rap1Q8BTW8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.01□□□□□ -0.01
Cdk5rap1Q8BTW8 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk5rap1Q8BTW8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cdk5rap1Q8BTW8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk5rap1Q8BTW8 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk5rap1Q8BTW8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk5rap1Q8BTW8 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk5rap1Q8BTW8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cdk5rap1Q8BTW8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk5rap1Q8BTW8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdk5rap1Q8BTW8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdk5rap1Q8BTW8 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdk5rap1Q8BTW8 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15□□□□□ -0.01
Cdk5rap1Q8BTW8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdk5rap1Q8BTW8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdk5rap1Q8BTW8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdk5rap1Q8BTW8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdk5rap1Q8BTW8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cdk5rap1Q8BTW8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdk5rap1Q8BTW8 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cdk5rap1Q8BTW8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdk5rap1Q8BTW8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15□□□□□ -0.01
Cdk5rap1Q8BTW8 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15□□□□□ -0.01
Cdk5rap1Q8BTW8 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15□□□□□ -0.01
Cdk5rap1Q8BTW8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cdk5rap1Q8BTW8 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15□□□□□ -0.01
Cdk5rap1Q8BTW8 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdk5rap1Q8BTW8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cdk5rap1Q8BTW8 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15□□□□□ -0.01
Cdk5rap1Q8BTW8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdk5rap1Q8BTW8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15□□□□□ -0.01
Cdk5rap1Q8BTW8 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15□□□□□ -0.01
Cdk5rap1Q8BTW8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Cdk5rap1Q8BTW8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdk5rap1Q8BTW8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdk5rap1Q8BTW8 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms