Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip4Q8BQP8 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip4Q8BQP8 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip4Q8BQP8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rab11fip4Q8BQP8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip4Q8BQP8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 Gm12644-201ENSMUST00000119935 606 ntBASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Rab11fip4Q8BQP8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab11fip4Q8BQP8 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab11fip4Q8BQP8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rab11fip4Q8BQP8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Rab11fip4Q8BQP8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab11fip4Q8BQP8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.54■□□□□ 0.4
Rab11fip4Q8BQP8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab11fip4Q8BQP8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
Rab11fip4Q8BQP8 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Rab11fip4Q8BQP8 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rab11fip4Q8BQP8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.54■□□□□ 0.4
Rab11fip4Q8BQP8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab11fip4Q8BQP8 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab11fip4Q8BQP8 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rab11fip4Q8BQP8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab11fip4Q8BQP8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab11fip4Q8BQP8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab11fip4Q8BQP8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab11fip4Q8BQP8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab11fip4Q8BQP8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.53■□□□□ 0.4
Rab11fip4Q8BQP8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rab11fip4Q8BQP8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rab11fip4Q8BQP8 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rab11fip4Q8BQP8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rab11fip4Q8BQP8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rab11fip4Q8BQP8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rab11fip4Q8BQP8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rab11fip4Q8BQP8 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.53■□□□□ 0.4
Rab11fip4Q8BQP8 Gm13312-201ENSMUST00000119631 718 ntBASIC17.53■□□□□ 0.4
Rab11fip4Q8BQP8 Gm11452-201ENSMUST00000122376 690 ntBASIC17.53■□□□□ 0.4
Rab11fip4Q8BQP8 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.53■□□□□ 0.4
Rab11fip4Q8BQP8 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rab11fip4Q8BQP8 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rab11fip4Q8BQP8 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rab11fip4Q8BQP8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rab11fip4Q8BQP8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.53■□□□□ 0.4
Rab11fip4Q8BQP8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rab11fip4Q8BQP8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rab11fip4Q8BQP8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rab11fip4Q8BQP8 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rab11fip4Q8BQP8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.52■□□□□ 0.4
Rab11fip4Q8BQP8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rab11fip4Q8BQP8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rab11fip4Q8BQP8 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Rab11fip4Q8BQP8 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rab11fip4Q8BQP8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Rab11fip4Q8BQP8 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rab11fip4Q8BQP8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rab11fip4Q8BQP8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rab11fip4Q8BQP8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Rab11fip4Q8BQP8 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rab11fip4Q8BQP8 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.52■□□□□ 0.4
Rab11fip4Q8BQP8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rab11fip4Q8BQP8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rab11fip4Q8BQP8 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rab11fip4Q8BQP8 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Rab11fip4Q8BQP8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rab11fip4Q8BQP8 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.52■□□□□ 0.4
Rab11fip4Q8BQP8 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rab11fip4Q8BQP8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rab11fip4Q8BQP8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rab11fip4Q8BQP8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms