Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Gm27405-201ENSMUST00000184201 112 ntBASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smco3Q8BQM7 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Gm27275-201ENSMUST00000184318 272 ntBASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smco3Q8BQM7 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.09□□□□□ -0.31
Smco3Q8BQM7 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.09□□□□□ -0.31
Smco3Q8BQM7 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smco3Q8BQM7 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.31
Smco3Q8BQM7 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
Smco3Q8BQM7 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms