Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sfr1Q8BP27 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Sfr1Q8BP27 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sfr1Q8BP27 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sfr1Q8BP27 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sfr1Q8BP27 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.12■□□□□ 0.17
Sfr1Q8BP27 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sfr1Q8BP27 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Sfr1Q8BP27 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sfr1Q8BP27 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sfr1Q8BP27 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Sfr1Q8BP27 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Sfr1Q8BP27 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sfr1Q8BP27 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sfr1Q8BP27 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sfr1Q8BP27 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sfr1Q8BP27 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sfr1Q8BP27 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sfr1Q8BP27 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Sfr1Q8BP27 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.12■□□□□ 0.17
Sfr1Q8BP27 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sfr1Q8BP27 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sfr1Q8BP27 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sfr1Q8BP27 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.11■□□□□ 0.17
Sfr1Q8BP27 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sfr1Q8BP27 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.11■□□□□ 0.17
Sfr1Q8BP27 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sfr1Q8BP27 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sfr1Q8BP27 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sfr1Q8BP27 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.11■□□□□ 0.17
Sfr1Q8BP27 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.11■□□□□ 0.17
Sfr1Q8BP27 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.11■□□□□ 0.17
Sfr1Q8BP27 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sfr1Q8BP27 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sfr1Q8BP27 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sfr1Q8BP27 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Sfr1Q8BP27 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sfr1Q8BP27 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Sfr1Q8BP27 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sfr1Q8BP27 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sfr1Q8BP27 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sfr1Q8BP27 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Sfr1Q8BP27 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sfr1Q8BP27 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sfr1Q8BP27 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.1■□□□□ 0.17
Sfr1Q8BP27 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Sfr1Q8BP27 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sfr1Q8BP27 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sfr1Q8BP27 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sfr1Q8BP27 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sfr1Q8BP27 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Sfr1Q8BP27 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sfr1Q8BP27 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Sfr1Q8BP27 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Sfr1Q8BP27 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sfr1Q8BP27 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sfr1Q8BP27 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Sfr1Q8BP27 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sfr1Q8BP27 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sfr1Q8BP27 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sfr1Q8BP27 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.1■□□□□ 0.17
Sfr1Q8BP27 Gm27867-201ENSMUST00000184778 125 ntBASIC16.1■□□□□ 0.17
Sfr1Q8BP27 Gm17971-201ENSMUST00000190239 806 ntBASIC16.1■□□□□ 0.17
Sfr1Q8BP27 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sfr1Q8BP27 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sfr1Q8BP27 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Sfr1Q8BP27 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sfr1Q8BP27 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sfr1Q8BP27 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
Sfr1Q8BP27 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sfr1Q8BP27 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.09■□□□□ 0.17
Sfr1Q8BP27 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sfr1Q8BP27 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sfr1Q8BP27 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Sfr1Q8BP27 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sfr1Q8BP27 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sfr1Q8BP27 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sfr1Q8BP27 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.09■□□□□ 0.17
Sfr1Q8BP27 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sfr1Q8BP27 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.09■□□□□ 0.17
Sfr1Q8BP27 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sfr1Q8BP27 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sfr1Q8BP27 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sfr1Q8BP27 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Sfr1Q8BP27 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.09■□□□□ 0.17
Sfr1Q8BP27 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Sfr1Q8BP27 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.09■□□□□ 0.17
Sfr1Q8BP27 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sfr1Q8BP27 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sfr1Q8BP27 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Sfr1Q8BP27 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sfr1Q8BP27 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sfr1Q8BP27 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sfr1Q8BP27 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sfr1Q8BP27 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sfr1Q8BP27 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Sfr1Q8BP27 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sfr1Q8BP27 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sfr1Q8BP27 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sfr1Q8BP27 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms