Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col16a1Q8BLX7 Gm7669-201ENSMUST00000210184 1603 ntBASIC20.66■□□□□ 0.9
Col16a1Q8BLX7 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Col16a1Q8BLX7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Col16a1Q8BLX7 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC20.66■□□□□ 0.9
Col16a1Q8BLX7 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Col16a1Q8BLX7 Gm13223-201ENSMUST00000118609 747 ntBASIC20.66■□□□□ 0.9
Col16a1Q8BLX7 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col16a1Q8BLX7 AC160980.1-201ENSMUST00000224136 970 ntBASIC20.66■□□□□ 0.9
Col16a1Q8BLX7 AC140375.2-201ENSMUST00000225283 584 ntBASIC20.66■□□□□ 0.9
Col16a1Q8BLX7 CT025555.1-201ENSMUST00000225901 1217 ntBASIC20.66■□□□□ 0.9
Col16a1Q8BLX7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col16a1Q8BLX7 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Col16a1Q8BLX7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Col16a1Q8BLX7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col16a1Q8BLX7 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col16a1Q8BLX7 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col16a1Q8BLX7 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col16a1Q8BLX7 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col16a1Q8BLX7 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col16a1Q8BLX7 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Col16a1Q8BLX7 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col16a1Q8BLX7 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Col16a1Q8BLX7 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col16a1Q8BLX7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col16a1Q8BLX7 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Col16a1Q8BLX7 Gm11453-201ENSMUST00000117318 1007 ntBASIC20.64■□□□□ 0.9
Col16a1Q8BLX7 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Col16a1Q8BLX7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col16a1Q8BLX7 Gm27437-201ENSMUST00000183429 107 ntBASIC20.64■□□□□ 0.9
Col16a1Q8BLX7 Gm18057-201ENSMUST00000208220 503 ntBASIC20.64■□□□□ 0.9
Col16a1Q8BLX7 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col16a1Q8BLX7 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col16a1Q8BLX7 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col16a1Q8BLX7 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col16a1Q8BLX7 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col16a1Q8BLX7 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col16a1Q8BLX7 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col16a1Q8BLX7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col16a1Q8BLX7 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col16a1Q8BLX7 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Col16a1Q8BLX7 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC20.63■□□□□ 0.89
Col16a1Q8BLX7 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Col16a1Q8BLX7 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Col16a1Q8BLX7 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Col16a1Q8BLX7 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col16a1Q8BLX7 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col16a1Q8BLX7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col16a1Q8BLX7 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col16a1Q8BLX7 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col16a1Q8BLX7 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col16a1Q8BLX7 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col16a1Q8BLX7 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC20.63■□□□□ 0.89
Col16a1Q8BLX7 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col16a1Q8BLX7 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Col16a1Q8BLX7 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Col16a1Q8BLX7 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC20.63■□□□□ 0.89
Col16a1Q8BLX7 AC125206.2-201ENSMUST00000217454 574 ntBASIC20.63■□□□□ 0.89
Col16a1Q8BLX7 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col16a1Q8BLX7 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col16a1Q8BLX7 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col16a1Q8BLX7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col16a1Q8BLX7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Col16a1Q8BLX7 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Col16a1Q8BLX7 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.62■□□□□ 0.89
Col16a1Q8BLX7 Gm6018-201ENSMUST00000216090 1306 ntBASIC20.62■□□□□ 0.89
Col16a1Q8BLX7 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col16a1Q8BLX7 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col16a1Q8BLX7 Gm14722-201ENSMUST00000118943 689 ntBASIC20.62■□□□□ 0.89
Col16a1Q8BLX7 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC20.62■□□□□ 0.89
Col16a1Q8BLX7 Mir6977-201ENSMUST00000184960 64 ntBASIC20.62■□□□□ 0.89
Col16a1Q8BLX7 AC131710.1-201ENSMUST00000228336 990 ntBASIC20.62■□□□□ 0.89
Col16a1Q8BLX7 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col16a1Q8BLX7 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Col16a1Q8BLX7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.62■□□□□ 0.89
Col16a1Q8BLX7 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC20.62■□□□□ 0.89
Col16a1Q8BLX7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.62■□□□□ 0.89
Col16a1Q8BLX7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col16a1Q8BLX7 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col16a1Q8BLX7 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Col16a1Q8BLX7 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col16a1Q8BLX7 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col16a1Q8BLX7 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col16a1Q8BLX7 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col16a1Q8BLX7 Gm15693-201ENSMUST00000120470 637 ntBASIC20.61■□□□□ 0.89
Col16a1Q8BLX7 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col16a1Q8BLX7 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC20.61■□□□□ 0.89
Col16a1Q8BLX7 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC20.61■□□□□ 0.89
Col16a1Q8BLX7 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col16a1Q8BLX7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col16a1Q8BLX7 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col16a1Q8BLX7 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col16a1Q8BLX7 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Col16a1Q8BLX7 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col16a1Q8BLX7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col16a1Q8BLX7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Col16a1Q8BLX7 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col16a1Q8BLX7 Gm44729-201ENSMUST00000206759 2052 ntBASIC20.61■□□□□ 0.89
Col16a1Q8BLX7 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC20.61■□□□□ 0.89
Col16a1Q8BLX7 Gm13410-201ENSMUST00000117058 1415 ntBASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms