Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp1Q8BJQ2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp1Q8BJQ2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Usp1Q8BJQ2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp1Q8BJQ2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp1Q8BJQ2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp1Q8BJQ2 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp1Q8BJQ2 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp1Q8BJQ2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp1Q8BJQ2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp1Q8BJQ2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.82■□□□□ 0.28
Usp1Q8BJQ2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp1Q8BJQ2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp1Q8BJQ2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp1Q8BJQ2 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp1Q8BJQ2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp1Q8BJQ2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp1Q8BJQ2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp1Q8BJQ2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp1Q8BJQ2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp1Q8BJQ2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp1Q8BJQ2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp1Q8BJQ2 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp1Q8BJQ2 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp1Q8BJQ2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.82■□□□□ 0.28
Usp1Q8BJQ2 Gm2756-201ENSMUST00000195851 400 ntBASIC16.82■□□□□ 0.28
Usp1Q8BJQ2 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.82■□□□□ 0.28
Usp1Q8BJQ2 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.82■□□□□ 0.28
Usp1Q8BJQ2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp1Q8BJQ2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Usp1Q8BJQ2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp1Q8BJQ2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.82■□□□□ 0.28
Usp1Q8BJQ2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp1Q8BJQ2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.81■□□□□ 0.28
Usp1Q8BJQ2 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp1Q8BJQ2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp1Q8BJQ2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Usp1Q8BJQ2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp1Q8BJQ2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp1Q8BJQ2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp1Q8BJQ2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp1Q8BJQ2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp1Q8BJQ2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp1Q8BJQ2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp1Q8BJQ2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp1Q8BJQ2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.81■□□□□ 0.28
Usp1Q8BJQ2 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.81■□□□□ 0.28
Usp1Q8BJQ2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.81■□□□□ 0.28
Usp1Q8BJQ2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.81■□□□□ 0.28
Usp1Q8BJQ2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp1Q8BJQ2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp1Q8BJQ2 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp1Q8BJQ2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp1Q8BJQ2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp1Q8BJQ2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp1Q8BJQ2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp1Q8BJQ2 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp1Q8BJQ2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Usp1Q8BJQ2 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp1Q8BJQ2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp1Q8BJQ2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp1Q8BJQ2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp1Q8BJQ2 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Usp1Q8BJQ2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp1Q8BJQ2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp1Q8BJQ2 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp1Q8BJQ2 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Usp1Q8BJQ2 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp1Q8BJQ2 Gm6736-201ENSMUST00000166583 948 ntBASIC16.8■□□□□ 0.28
Usp1Q8BJQ2 Gm27702-201ENSMUST00000184512 56 ntBASIC16.8■□□□□ 0.28
Usp1Q8BJQ2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.8■□□□□ 0.28
Usp1Q8BJQ2 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Usp1Q8BJQ2 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp1Q8BJQ2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp1Q8BJQ2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Usp1Q8BJQ2 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Usp1Q8BJQ2 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp1Q8BJQ2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp1Q8BJQ2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp1Q8BJQ2 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Usp1Q8BJQ2 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp1Q8BJQ2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp1Q8BJQ2 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp1Q8BJQ2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp1Q8BJQ2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp1Q8BJQ2 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp1Q8BJQ2 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.79■□□□□ 0.28
Usp1Q8BJQ2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp1Q8BJQ2 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp1Q8BJQ2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp1Q8BJQ2 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp1Q8BJQ2 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp1Q8BJQ2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.79■□□□□ 0.28
Usp1Q8BJQ2 Gm14494-201ENSMUST00000118786 435 ntBASIC16.79■□□□□ 0.28
Usp1Q8BJQ2 Gm11764-201ENSMUST00000120221 623 ntBASIC16.79■□□□□ 0.28
Usp1Q8BJQ2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.79■□□□□ 0.28
Usp1Q8BJQ2 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Usp1Q8BJQ2 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp1Q8BJQ2 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp1Q8BJQ2 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms