Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnrc18Q80WC3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Tnrc18Q80WC3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tnrc18Q80WC3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnrc18Q80WC3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnrc18Q80WC3 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.64■□□□□ 0.09
Tnrc18Q80WC3 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnrc18Q80WC3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnrc18Q80WC3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnrc18Q80WC3 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.64■□□□□ 0.09
Tnrc18Q80WC3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnrc18Q80WC3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnrc18Q80WC3 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Tnrc18Q80WC3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Tnrc18Q80WC3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Tnrc18Q80WC3 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.64■□□□□ 0.09
Tnrc18Q80WC3 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Tnrc18Q80WC3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnrc18Q80WC3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnrc18Q80WC3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tnrc18Q80WC3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.64■□□□□ 0.09
Tnrc18Q80WC3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnrc18Q80WC3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnrc18Q80WC3 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tnrc18Q80WC3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tnrc18Q80WC3 Gm6973-201ENSMUST00000117080 721 ntBASIC15.63■□□□□ 0.09
Tnrc18Q80WC3 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.63■□□□□ 0.09
Tnrc18Q80WC3 Gm43433-201ENSMUST00000196573 481 ntBASIC15.63■□□□□ 0.09
Tnrc18Q80WC3 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tnrc18Q80WC3 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Tnrc18Q80WC3 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnrc18Q80WC3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.63■□□□□ 0.09
Tnrc18Q80WC3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.63■□□□□ 0.09
Tnrc18Q80WC3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnrc18Q80WC3 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.63■□□□□ 0.09
Tnrc18Q80WC3 Mir8102-201ENSMUST00000184148 139 ntBASIC15.63■□□□□ 0.09
Tnrc18Q80WC3 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Tnrc18Q80WC3 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.63■□□□□ 0.09
Tnrc18Q80WC3 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.63■□□□□ 0.09
Tnrc18Q80WC3 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
Tnrc18Q80WC3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tnrc18Q80WC3 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnrc18Q80WC3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.62■□□□□ 0.09
Tnrc18Q80WC3 Gm44855-201ENSMUST00000205725 362 ntBASIC15.62■□□□□ 0.09
Tnrc18Q80WC3 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnrc18Q80WC3 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnrc18Q80WC3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.62■□□□□ 0.09
Tnrc18Q80WC3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnrc18Q80WC3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Tnrc18Q80WC3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.62■□□□□ 0.09
Tnrc18Q80WC3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.62■□□□□ 0.09
Tnrc18Q80WC3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.62■□□□□ 0.09
Tnrc18Q80WC3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Tnrc18Q80WC3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnrc18Q80WC3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnrc18Q80WC3 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnrc18Q80WC3 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.62■□□□□ 0.09
Tnrc18Q80WC3 Gm28630-201ENSMUST00000187806 498 ntBASIC15.62■□□□□ 0.09
Tnrc18Q80WC3 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnrc18Q80WC3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnrc18Q80WC3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnrc18Q80WC3 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnrc18Q80WC3 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnrc18Q80WC3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnrc18Q80WC3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Tnrc18Q80WC3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnrc18Q80WC3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnrc18Q80WC3 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnrc18Q80WC3 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Tnrc18Q80WC3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnrc18Q80WC3 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Gm24694-201ENSMUST00000180054 110 ntBASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Gm27663-201ENSMUST00000184839 110 ntBASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Gm27989-201ENSMUST00000184721 107 ntBASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Gm18766-201ENSMUST00000189811 808 ntBASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms