Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rpp38Q80UU2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Rpp38Q80UU2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rpp38Q80UU2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rpp38Q80UU2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.83■□□□□ 0.12
Rpp38Q80UU2 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rpp38Q80UU2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rpp38Q80UU2 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rpp38Q80UU2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rpp38Q80UU2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rpp38Q80UU2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Rpp38Q80UU2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp38Q80UU2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp38Q80UU2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp38Q80UU2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp38Q80UU2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp38Q80UU2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp38Q80UU2 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp38Q80UU2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.82■□□□□ 0.12
Rpp38Q80UU2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.82■□□□□ 0.12
Rpp38Q80UU2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.82■□□□□ 0.12
Rpp38Q80UU2 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp38Q80UU2 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp38Q80UU2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp38Q80UU2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp38Q80UU2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rpp38Q80UU2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rpp38Q80UU2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp38Q80UU2 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.82■□□□□ 0.12
Rpp38Q80UU2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp38Q80UU2 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp38Q80UU2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rpp38Q80UU2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp38Q80UU2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpp38Q80UU2 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Rpp38Q80UU2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp38Q80UU2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp38Q80UU2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Rpp38Q80UU2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp38Q80UU2 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Rpp38Q80UU2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.81■□□□□ 0.12
Rpp38Q80UU2 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.81■□□□□ 0.12
Rpp38Q80UU2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.81■□□□□ 0.12
Rpp38Q80UU2 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Rpp38Q80UU2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.81■□□□□ 0.12
Rpp38Q80UU2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp38Q80UU2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.81■□□□□ 0.12
Rpp38Q80UU2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp38Q80UU2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp38Q80UU2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp38Q80UU2 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp38Q80UU2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp38Q80UU2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp38Q80UU2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp38Q80UU2 App-207ENSMUST00000227737 2827 ntBASIC15.81■□□□□ 0.12
Rpp38Q80UU2 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp38Q80UU2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp38Q80UU2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp38Q80UU2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
Rpp38Q80UU2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp38Q80UU2 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp38Q80UU2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp38Q80UU2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp38Q80UU2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp38Q80UU2 Gm9103-201ENSMUST00000119371 405 ntBASIC15.8■□□□□ 0.12
Rpp38Q80UU2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp38Q80UU2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp38Q80UU2 Gm18622-201ENSMUST00000219361 595 ntBASIC15.8■□□□□ 0.12
Rpp38Q80UU2 Gm8655-201ENSMUST00000221159 852 ntBASIC15.8■□□□□ 0.12
Rpp38Q80UU2 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.8■□□□□ 0.12
Rpp38Q80UU2 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.8■□□□□ 0.12
Rpp38Q80UU2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Rpp38Q80UU2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp38Q80UU2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp38Q80UU2 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp38Q80UU2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp38Q80UU2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp38Q80UU2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp38Q80UU2 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp38Q80UU2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp38Q80UU2 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp38Q80UU2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp38Q80UU2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp38Q80UU2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rpp38Q80UU2 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp38Q80UU2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp38Q80UU2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp38Q80UU2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpp38Q80UU2 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpp38Q80UU2 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpp38Q80UU2 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpp38Q80UU2 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.79■□□□□ 0.12
Rpp38Q80UU2 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpp38Q80UU2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpp38Q80UU2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rpp38Q80UU2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rpp38Q80UU2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Rpp38Q80UU2 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpp38Q80UU2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rpp38Q80UU2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms