Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.38■□□□□ 0.37
Sh3d21Q7TSG5 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Sh3d21Q7TSG5 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3d21Q7TSG5 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3d21Q7TSG5 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3d21Q7TSG5 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.38■□□□□ 0.37
Sh3d21Q7TSG5 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3d21Q7TSG5 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3d21Q7TSG5 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3d21Q7TSG5 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3d21Q7TSG5 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3d21Q7TSG5 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3d21Q7TSG5 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3d21Q7TSG5 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Sh3d21Q7TSG5 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3d21Q7TSG5 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3d21Q7TSG5 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3d21Q7TSG5 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3d21Q7TSG5 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3d21Q7TSG5 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3d21Q7TSG5 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3d21Q7TSG5 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Sh3d21Q7TSG5 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3d21Q7TSG5 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Sh3d21Q7TSG5 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3d21Q7TSG5 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.37■□□□□ 0.37
Sh3d21Q7TSG5 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Sh3d21Q7TSG5 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3d21Q7TSG5 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3d21Q7TSG5 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3d21Q7TSG5 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3d21Q7TSG5 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3d21Q7TSG5 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3d21Q7TSG5 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3d21Q7TSG5 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3d21Q7TSG5 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3d21Q7TSG5 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3d21Q7TSG5 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.36■□□□□ 0.37
Sh3d21Q7TSG5 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.36■□□□□ 0.37
Sh3d21Q7TSG5 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3d21Q7TSG5 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Sh3d21Q7TSG5 Rprl3-201ENSMUST00000157400 290 ntBASIC17.36■□□□□ 0.37
Sh3d21Q7TSG5 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3d21Q7TSG5 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.36■□□□□ 0.37
Sh3d21Q7TSG5 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3d21Q7TSG5 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Sh3d21Q7TSG5 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3d21Q7TSG5 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3d21Q7TSG5 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Sh3d21Q7TSG5 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3d21Q7TSG5 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3d21Q7TSG5 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.36■□□□□ 0.37
Sh3d21Q7TSG5 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Mir3081-201ENSMUST00000175305 84 ntBASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3d21Q7TSG5 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.34■□□□□ 0.37
Sh3d21Q7TSG5 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.34■□□□□ 0.37
Sh3d21Q7TSG5 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3d21Q7TSG5 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3d21Q7TSG5 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.34■□□□□ 0.37
Sh3d21Q7TSG5 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3d21Q7TSG5 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.34■□□□□ 0.37
Sh3d21Q7TSG5 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Sh3d21Q7TSG5 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3d21Q7TSG5 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.34■□□□□ 0.37
Sh3d21Q7TSG5 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3d21Q7TSG5 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3d21Q7TSG5 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3d21Q7TSG5 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3d21Q7TSG5 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3d21Q7TSG5 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms