Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Npc1l1Q6T3U4 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.98■□□□□ 0.63
Npc1l1Q6T3U4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Npc1l1Q6T3U4 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Npc1l1Q6T3U4 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.98■□□□□ 0.63
Npc1l1Q6T3U4 Gm13036-201ENSMUST00000117799 748 ntBASIC18.98■□□□□ 0.63
Npc1l1Q6T3U4 Gm14140-201ENSMUST00000119999 995 ntBASIC18.98■□□□□ 0.63
Npc1l1Q6T3U4 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Npc1l1Q6T3U4 Gm6736-201ENSMUST00000166583 948 ntBASIC18.98■□□□□ 0.63
Npc1l1Q6T3U4 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Npc1l1Q6T3U4 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Npc1l1Q6T3U4 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.98■□□□□ 0.63
Npc1l1Q6T3U4 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.98■□□□□ 0.63
Npc1l1Q6T3U4 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Npc1l1Q6T3U4 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Npc1l1Q6T3U4 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Npc1l1Q6T3U4 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Npc1l1Q6T3U4 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Npc1l1Q6T3U4 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Npc1l1Q6T3U4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Npc1l1Q6T3U4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Npc1l1Q6T3U4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Npc1l1Q6T3U4 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Npc1l1Q6T3U4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Npc1l1Q6T3U4 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Npc1l1Q6T3U4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Npc1l1Q6T3U4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Npc1l1Q6T3U4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Npc1l1Q6T3U4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Npc1l1Q6T3U4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Npc1l1Q6T3U4 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Npc1l1Q6T3U4 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Npc1l1Q6T3U4 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Npc1l1Q6T3U4 Gm18622-201ENSMUST00000219361 595 ntBASIC18.97■□□□□ 0.63
Npc1l1Q6T3U4 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Npc1l1Q6T3U4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Npc1l1Q6T3U4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Npc1l1Q6T3U4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Npc1l1Q6T3U4 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Npc1l1Q6T3U4 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Npc1l1Q6T3U4 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Npc1l1Q6T3U4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Npc1l1Q6T3U4 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.96■□□□□ 0.63
Npc1l1Q6T3U4 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Npc1l1Q6T3U4 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.96■□□□□ 0.63
Npc1l1Q6T3U4 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Npc1l1Q6T3U4 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Npc1l1Q6T3U4 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Npc1l1Q6T3U4 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.96■□□□□ 0.63
Npc1l1Q6T3U4 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Npc1l1Q6T3U4 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Npc1l1Q6T3U4 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Npc1l1Q6T3U4 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.95■□□□□ 0.62
Npc1l1Q6T3U4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Npc1l1Q6T3U4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Npc1l1Q6T3U4 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Npc1l1Q6T3U4 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Npc1l1Q6T3U4 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Npc1l1Q6T3U4 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Npc1l1Q6T3U4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Npc1l1Q6T3U4 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Npc1l1Q6T3U4 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Npc1l1Q6T3U4 Gm23935-201ENSMUST00000102303 57 ntBASIC18.95■□□□□ 0.62
Npc1l1Q6T3U4 Gm24270-201ENSMUST00000102326 57 ntBASIC18.95■□□□□ 0.62
Npc1l1Q6T3U4 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Npc1l1Q6T3U4 Gm11764-201ENSMUST00000120221 623 ntBASIC18.95■□□□□ 0.62
Npc1l1Q6T3U4 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.95■□□□□ 0.62
Npc1l1Q6T3U4 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Npc1l1Q6T3U4 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.95■□□□□ 0.62
Npc1l1Q6T3U4 Gm24245-201ENSMUST00000157318 57 ntBASIC18.95■□□□□ 0.62
Npc1l1Q6T3U4 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.95■□□□□ 0.62
Npc1l1Q6T3U4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.95■□□□□ 0.62
Npc1l1Q6T3U4 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.95■□□□□ 0.62
Npc1l1Q6T3U4 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Npc1l1Q6T3U4 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Npc1l1Q6T3U4 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.95■□□□□ 0.62
Npc1l1Q6T3U4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Npc1l1Q6T3U4 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Npc1l1Q6T3U4 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Npc1l1Q6T3U4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Npc1l1Q6T3U4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Npc1l1Q6T3U4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Npc1l1Q6T3U4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Npc1l1Q6T3U4 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Npc1l1Q6T3U4 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.94■□□□□ 0.62
Npc1l1Q6T3U4 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Npc1l1Q6T3U4 Gm9727-201ENSMUST00000161387 555 ntBASIC18.94■□□□□ 0.62
Npc1l1Q6T3U4 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.94■□□□□ 0.62
Npc1l1Q6T3U4 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.94■□□□□ 0.62
Npc1l1Q6T3U4 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Npc1l1Q6T3U4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Npc1l1Q6T3U4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Npc1l1Q6T3U4 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Npc1l1Q6T3U4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Npc1l1Q6T3U4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Npc1l1Q6T3U4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Npc1l1Q6T3U4 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Npc1l1Q6T3U4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Npc1l1Q6T3U4 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Npc1l1Q6T3U4 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms