Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rif1Q6PR54 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rif1Q6PR54 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rif1Q6PR54 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rif1Q6PR54 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Rif1Q6PR54 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.34□□□□□ -0.27
Rif1Q6PR54 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.34□□□□□ -0.27
Rif1Q6PR54 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rif1Q6PR54 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.33□□□□□ -0.27
Rif1Q6PR54 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rif1Q6PR54 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.33□□□□□ -0.27
Rif1Q6PR54 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Rif1Q6PR54 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rif1Q6PR54 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rif1Q6PR54 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.33□□□□□ -0.28
Rif1Q6PR54 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rif1Q6PR54 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rif1Q6PR54 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rif1Q6PR54 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Rif1Q6PR54 Gm15321-201ENSMUST00000121290 288 ntBASIC13.33□□□□□ -0.28
Rif1Q6PR54 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Rif1Q6PR54 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rif1Q6PR54 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rif1Q6PR54 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rif1Q6PR54 Gm27838-201ENSMUST00000184829 128 ntBASIC13.33□□□□□ -0.28
Rif1Q6PR54 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.33□□□□□ -0.28
Rif1Q6PR54 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rif1Q6PR54 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rif1Q6PR54 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rif1Q6PR54 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rif1Q6PR54 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rif1Q6PR54 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rif1Q6PR54 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rif1Q6PR54 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.32□□□□□ -0.28
Rif1Q6PR54 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rif1Q6PR54 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rif1Q6PR54 Mir5132-201ENSMUST00000175166 71 ntBASIC13.32□□□□□ -0.28
Rif1Q6PR54 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.32□□□□□ -0.28
Rif1Q6PR54 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rif1Q6PR54 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.32□□□□□ -0.28
Rif1Q6PR54 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rif1Q6PR54 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rif1Q6PR54 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.32□□□□□ -0.28
Rif1Q6PR54 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rif1Q6PR54 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rif1Q6PR54 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rif1Q6PR54 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rif1Q6PR54 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rif1Q6PR54 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rif1Q6PR54 Gm12742-201ENSMUST00000117326 410 ntBASIC13.32□□□□□ -0.28
Rif1Q6PR54 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rif1Q6PR54 Gm6218-201ENSMUST00000219812 628 ntBASIC13.32□□□□□ -0.28
Rif1Q6PR54 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rif1Q6PR54 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rif1Q6PR54 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rif1Q6PR54 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rif1Q6PR54 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rif1Q6PR54 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rif1Q6PR54 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rif1Q6PR54 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.31□□□□□ -0.28
Rif1Q6PR54 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rif1Q6PR54 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Rif1Q6PR54 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rif1Q6PR54 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rif1Q6PR54 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rif1Q6PR54 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Rif1Q6PR54 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Rif1Q6PR54 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rif1Q6PR54 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.31□□□□□ -0.28
Rif1Q6PR54 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rif1Q6PR54 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rif1Q6PR54 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rif1Q6PR54 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rif1Q6PR54 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rif1Q6PR54 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rif1Q6PR54 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rif1Q6PR54 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rif1Q6PR54 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rif1Q6PR54 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rif1Q6PR54 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Rif1Q6PR54 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rif1Q6PR54 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rif1Q6PR54 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Gm37424-201ENSMUST00000191727 561 ntBASIC13.3□□□□□ -0.28
Rif1Q6PR54 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rif1Q6PR54 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.3□□□□□ -0.28
Rif1Q6PR54 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms