Protein–RNA interactions for Protein: Q6PE13

Prrt3, Proline-rich transmembrane protein 3, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt3Q6PE13 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prrt3Q6PE13 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prrt3Q6PE13 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prrt3Q6PE13 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prrt3Q6PE13 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Prrt3Q6PE13 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prrt3Q6PE13 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prrt3Q6PE13 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prrt3Q6PE13 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Prrt3Q6PE13 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prrt3Q6PE13 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prrt3Q6PE13 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Prrt3Q6PE13 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prrt3Q6PE13 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Prrt3Q6PE13 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Prrt3Q6PE13 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prrt3Q6PE13 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prrt3Q6PE13 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Prrt3Q6PE13 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.62■□□□□ 0.25
Prrt3Q6PE13 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prrt3Q6PE13 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Prrt3Q6PE13 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prrt3Q6PE13 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prrt3Q6PE13 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prrt3Q6PE13 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.62■□□□□ 0.25
Prrt3Q6PE13 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prrt3Q6PE13 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Prrt3Q6PE13 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prrt3Q6PE13 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.62■□□□□ 0.25
Prrt3Q6PE13 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prrt3Q6PE13 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Prrt3Q6PE13 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Prrt3Q6PE13 Gm14140-201ENSMUST00000119999 995 ntBASIC16.62■□□□□ 0.25
Prrt3Q6PE13 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Prrt3Q6PE13 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.62■□□□□ 0.25
Prrt3Q6PE13 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.62■□□□□ 0.25
Prrt3Q6PE13 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.62■□□□□ 0.25
Prrt3Q6PE13 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prrt3Q6PE13 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prrt3Q6PE13 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prrt3Q6PE13 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prrt3Q6PE13 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prrt3Q6PE13 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prrt3Q6PE13 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prrt3Q6PE13 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.61■□□□□ 0.25
Prrt3Q6PE13 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Prrt3Q6PE13 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Prrt3Q6PE13 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Prrt3Q6PE13 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prrt3Q6PE13 Gm4995-201ENSMUST00000117247 432 ntBASIC16.61■□□□□ 0.25
Prrt3Q6PE13 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.61■□□□□ 0.25
Prrt3Q6PE13 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Prrt3Q6PE13 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prrt3Q6PE13 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prrt3Q6PE13 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Prrt3Q6PE13 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prrt3Q6PE13 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.61■□□□□ 0.25
Prrt3Q6PE13 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Prrt3Q6PE13 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prrt3Q6PE13 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Prrt3Q6PE13 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prrt3Q6PE13 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.61■□□□□ 0.25
Prrt3Q6PE13 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prrt3Q6PE13 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prrt3Q6PE13 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prrt3Q6PE13 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Prrt3Q6PE13 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.6■□□□□ 0.25
Prrt3Q6PE13 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Prrt3Q6PE13 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.6■□□□□ 0.25
Prrt3Q6PE13 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Prrt3Q6PE13 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.6■□□□□ 0.25
Prrt3Q6PE13 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Prrt3Q6PE13 Gm5682-201ENSMUST00000173402 505 ntBASIC16.6■□□□□ 0.25
Prrt3Q6PE13 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.6■□□□□ 0.25
Prrt3Q6PE13 Gm38230-201ENSMUST00000193572 1159 ntBASIC16.6■□□□□ 0.25
Prrt3Q6PE13 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Prrt3Q6PE13 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prrt3Q6PE13 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC16.6■□□□□ 0.25
Prrt3Q6PE13 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prrt3Q6PE13 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prrt3Q6PE13 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Prrt3Q6PE13 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prrt3Q6PE13 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prrt3Q6PE13 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prrt3Q6PE13 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Prrt3Q6PE13 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prrt3Q6PE13 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prrt3Q6PE13 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prrt3Q6PE13 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prrt3Q6PE13 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prrt3Q6PE13 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prrt3Q6PE13 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prrt3Q6PE13 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Prrt3Q6PE13 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prrt3Q6PE13 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Prrt3Q6PE13 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.59■□□□□ 0.25
Prrt3Q6PE13 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prrt3Q6PE13 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Prrt3Q6PE13 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prrt3Q6PE13 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms