Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.34■□□□□ 0.37
Smchd1Q6P5D8 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Smchd1Q6P5D8 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Smchd1Q6P5D8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smchd1Q6P5D8 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Smchd1Q6P5D8 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smchd1Q6P5D8 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Smchd1Q6P5D8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smchd1Q6P5D8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smchd1Q6P5D8 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smchd1Q6P5D8 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smchd1Q6P5D8 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smchd1Q6P5D8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smchd1Q6P5D8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smchd1Q6P5D8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.33■□□□□ 0.37
Smchd1Q6P5D8 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smchd1Q6P5D8 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Smchd1Q6P5D8 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Smchd1Q6P5D8 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.33■□□□□ 0.37
Smchd1Q6P5D8 Gm27702-201ENSMUST00000184512 56 ntBASIC17.33■□□□□ 0.37
Smchd1Q6P5D8 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.33■□□□□ 0.37
Smchd1Q6P5D8 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Smchd1Q6P5D8 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smchd1Q6P5D8 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smchd1Q6P5D8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smchd1Q6P5D8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.33■□□□□ 0.37
Smchd1Q6P5D8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.33■□□□□ 0.37
Smchd1Q6P5D8 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.33■□□□□ 0.37
Smchd1Q6P5D8 App-207ENSMUST00000227737 2827 ntBASIC17.33■□□□□ 0.37
Smchd1Q6P5D8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smchd1Q6P5D8 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.33■□□□□ 0.36
Smchd1Q6P5D8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Smchd1Q6P5D8 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smchd1Q6P5D8 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.33■□□□□ 0.36
Smchd1Q6P5D8 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.33■□□□□ 0.36
Smchd1Q6P5D8 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smchd1Q6P5D8 Gm17968-201ENSMUST00000194902 784 ntBASIC17.33■□□□□ 0.36
Smchd1Q6P5D8 Gm43575-201ENSMUST00000196420 516 ntBASIC17.33■□□□□ 0.36
Smchd1Q6P5D8 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smchd1Q6P5D8 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smchd1Q6P5D8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smchd1Q6P5D8 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.32■□□□□ 0.36
Smchd1Q6P5D8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smchd1Q6P5D8 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smchd1Q6P5D8 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smchd1Q6P5D8 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Smchd1Q6P5D8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smchd1Q6P5D8 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smchd1Q6P5D8 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smchd1Q6P5D8 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smchd1Q6P5D8 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.32■□□□□ 0.36
Smchd1Q6P5D8 Gm8000-201ENSMUST00000188378 592 ntBASIC17.32■□□□□ 0.36
Smchd1Q6P5D8 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.32■□□□□ 0.36
Smchd1Q6P5D8 Gm19164-201ENSMUST00000210667 640 ntBASIC17.32■□□□□ 0.36
Smchd1Q6P5D8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smchd1Q6P5D8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.32■□□□□ 0.36
Smchd1Q6P5D8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smchd1Q6P5D8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smchd1Q6P5D8 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.31■□□□□ 0.36
Smchd1Q6P5D8 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.31■□□□□ 0.36
Smchd1Q6P5D8 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smchd1Q6P5D8 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.31■□□□□ 0.36
Smchd1Q6P5D8 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Smchd1Q6P5D8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smchd1Q6P5D8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smchd1Q6P5D8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smchd1Q6P5D8 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smchd1Q6P5D8 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smchd1Q6P5D8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smchd1Q6P5D8 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.31■□□□□ 0.36
Smchd1Q6P5D8 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Smchd1Q6P5D8 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smchd1Q6P5D8 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.31■□□□□ 0.36
Smchd1Q6P5D8 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smchd1Q6P5D8 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.31■□□□□ 0.36
Smchd1Q6P5D8 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.31■□□□□ 0.36
Smchd1Q6P5D8 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.31■□□□□ 0.36
Smchd1Q6P5D8 Gm18246-201ENSMUST00000221023 728 ntBASIC17.31■□□□□ 0.36
Smchd1Q6P5D8 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smchd1Q6P5D8 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Smchd1Q6P5D8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smchd1Q6P5D8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Smchd1Q6P5D8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smchd1Q6P5D8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smchd1Q6P5D8 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smchd1Q6P5D8 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smchd1Q6P5D8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.31■□□□□ 0.36
Smchd1Q6P5D8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smchd1Q6P5D8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smchd1Q6P5D8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.3■□□□□ 0.36
Smchd1Q6P5D8 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Smchd1Q6P5D8 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smchd1Q6P5D8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smchd1Q6P5D8 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.3■□□□□ 0.36
Smchd1Q6P5D8 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smchd1Q6P5D8 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.3■□□□□ 0.36
Smchd1Q6P5D8 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.3■□□□□ 0.36
Smchd1Q6P5D8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smchd1Q6P5D8 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smchd1Q6P5D8 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms