Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Clcn1Q64347 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn1Q64347 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Clcn1Q64347 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn1Q64347 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn1Q64347 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn1Q64347 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn1Q64347 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Clcn1Q64347 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn1Q64347 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn1Q64347 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn1Q64347 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn1Q64347 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC20.01■□□□□ 0.79
Clcn1Q64347 Gm11764-201ENSMUST00000120221 623 ntBASIC20.01■□□□□ 0.79
Clcn1Q64347 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Clcn1Q64347 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn1Q64347 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC20.01■□□□□ 0.79
Clcn1Q64347 Gm10576-201ENSMUST00000191927 825 ntBASIC20.01■□□□□ 0.79
Clcn1Q64347 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC20.01■□□□□ 0.79
Clcn1Q64347 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn1Q64347 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn1Q64347 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Clcn1Q64347 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
Clcn1Q64347 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn1Q64347 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn1Q64347 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn1Q64347 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn1Q64347 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn1Q64347 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Clcn1Q64347 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn1Q64347 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn1Q64347 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC20■□□□□ 0.79
Clcn1Q64347 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Clcn1Q64347 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn1Q64347 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC20■□□□□ 0.79
Clcn1Q64347 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn1Q64347 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC20■□□□□ 0.79
Clcn1Q64347 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn1Q64347 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn1Q64347 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC20■□□□□ 0.79
Clcn1Q64347 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC20■□□□□ 0.79
Clcn1Q64347 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Clcn1Q64347 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn1Q64347 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC20■□□□□ 0.79
Clcn1Q64347 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn1Q64347 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC20■□□□□ 0.79
Clcn1Q64347 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn1Q64347 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC20■□□□□ 0.79
Clcn1Q64347 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn1Q64347 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clcn1Q64347 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clcn1Q64347 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Clcn1Q64347 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Clcn1Q64347 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clcn1Q64347 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clcn1Q64347 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Clcn1Q64347 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC19.99■□□□□ 0.79
Clcn1Q64347 Gm17968-201ENSMUST00000194902 784 ntBASIC19.99■□□□□ 0.79
Clcn1Q64347 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC19.99■□□□□ 0.79
Clcn1Q64347 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clcn1Q64347 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clcn1Q64347 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.99■□□□□ 0.79
Clcn1Q64347 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clcn1Q64347 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Clcn1Q64347 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
Clcn1Q64347 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clcn1Q64347 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Clcn1Q64347 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clcn1Q64347 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clcn1Q64347 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clcn1Q64347 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Clcn1Q64347 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clcn1Q64347 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clcn1Q64347 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Clcn1Q64347 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC19.98■□□□□ 0.79
Clcn1Q64347 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clcn1Q64347 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clcn1Q64347 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC19.98■□□□□ 0.79
Clcn1Q64347 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clcn1Q64347 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Clcn1Q64347 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clcn1Q64347 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clcn1Q64347 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.98■□□□□ 0.79
Clcn1Q64347 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clcn1Q64347 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.98■□□□□ 0.79
Clcn1Q64347 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.97■□□□□ 0.79
Clcn1Q64347 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Clcn1Q64347 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Clcn1Q64347 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn1Q64347 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn1Q64347 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Clcn1Q64347 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn1Q64347 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn1Q64347 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn1Q64347 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn1Q64347 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn1Q64347 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn1Q64347 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.97■□□□□ 0.79
Clcn1Q64347 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn1Q64347 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms