Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Zfp248Q640N4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Zfp248Q640N4 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Zfp248Q640N4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Zfp248Q640N4 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Zfp248Q640N4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Zfp248Q640N4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.09□□□□□ -0.47
Zfp248Q640N4 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Zfp248Q640N4 Gm44430-201ENSMUST00000203376 995 ntBASIC12.09□□□□□ -0.47
Zfp248Q640N4 Gm18032-201ENSMUST00000222541 538 ntBASIC12.09□□□□□ -0.47
Zfp248Q640N4 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Zfp248Q640N4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Zfp248Q640N4 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.09□□□□□ -0.47
Zfp248Q640N4 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Zfp248Q640N4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Zfp248Q640N4 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Zfp248Q640N4 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Zfp248Q640N4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Zfp248Q640N4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Zfp248Q640N4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.08□□□□□ -0.47
Zfp248Q640N4 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.08□□□□□ -0.47
Zfp248Q640N4 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp248Q640N4 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.08□□□□□ -0.48
Zfp248Q640N4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp248Q640N4 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp248Q640N4 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.08□□□□□ -0.48
Zfp248Q640N4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp248Q640N4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp248Q640N4 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp248Q640N4 Gm10013-201ENSMUST00000106074 672 ntBASIC12.08□□□□□ -0.48
Zfp248Q640N4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.08□□□□□ -0.48
Zfp248Q640N4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp248Q640N4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.08□□□□□ -0.48
Zfp248Q640N4 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Zfp248Q640N4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Zfp248Q640N4 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.08□□□□□ -0.48
Zfp248Q640N4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Zfp248Q640N4 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp248Q640N4 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.08□□□□□ -0.48
Zfp248Q640N4 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp248Q640N4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Zfp248Q640N4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp248Q640N4 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp248Q640N4 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp248Q640N4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp248Q640N4 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp248Q640N4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp248Q640N4 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Zfp248Q640N4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp248Q640N4 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp248Q640N4 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp248Q640N4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp248Q640N4 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.07□□□□□ -0.48
Zfp248Q640N4 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.07□□□□□ -0.48
Zfp248Q640N4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp248Q640N4 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Zfp248Q640N4 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp248Q640N4 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp248Q640N4 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp248Q640N4 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp248Q640N4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp248Q640N4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp248Q640N4 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.07□□□□□ -0.48
Zfp248Q640N4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp248Q640N4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Zfp248Q640N4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Zfp248Q640N4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp248Q640N4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.07□□□□□ -0.48
Zfp248Q640N4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp248Q640N4 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp248Q640N4 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp248Q640N4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp248Q640N4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Zfp248Q640N4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp248Q640N4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp248Q640N4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp248Q640N4 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp248Q640N4 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp248Q640N4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp248Q640N4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp248Q640N4 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.07□□□□□ -0.48
Zfp248Q640N4 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Zfp248Q640N4 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Zfp248Q640N4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp248Q640N4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Zfp248Q640N4 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp248Q640N4 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms