Protein–RNA interactions for Protein: Q62225

Cish, Cytokine-inducible SH2-containing protein, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CishQ62225 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.12■□□□□ 0.01
CishQ62225 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.12■□□□□ 0.01
CishQ62225 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
CishQ62225 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CishQ62225 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.12■□□□□ 0.01
CishQ62225 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CishQ62225 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CishQ62225 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CishQ62225 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CishQ62225 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CishQ62225 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CishQ62225 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CishQ62225 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CishQ62225 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CishQ62225 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.11■□□□□ 0.01
CishQ62225 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CishQ62225 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CishQ62225 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.11■□□□□ 0.01
CishQ62225 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.11■□□□□ 0.01
CishQ62225 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CishQ62225 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.11■□□□□ 0.01
CishQ62225 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.11■□□□□ 0.01
CishQ62225 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CishQ62225 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CishQ62225 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CishQ62225 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CishQ62225 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CishQ62225 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.11■□□□□ 0.01
CishQ62225 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CishQ62225 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CishQ62225 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CishQ62225 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.11■□□□□ 0.01
CishQ62225 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CishQ62225 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CishQ62225 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CishQ62225 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CishQ62225 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CishQ62225 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CishQ62225 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CishQ62225 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.1■□□□□ 0.01
CishQ62225 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.1■□□□□ 0.01
CishQ62225 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CishQ62225 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CishQ62225 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CishQ62225 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CishQ62225 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.1■□□□□ 0.01
CishQ62225 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CishQ62225 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.1■□□□□ 0.01
CishQ62225 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CishQ62225 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.1■□□□□ 0.01
CishQ62225 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CishQ62225 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.1■□□□□ 0.01
CishQ62225 Gm8655-201ENSMUST00000221159 852 ntBASIC15.1■□□□□ 0.01
CishQ62225 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CishQ62225 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.1■□□□□ 0.01
CishQ62225 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.1■□□□□ 0.01
CishQ62225 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CishQ62225 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CishQ62225 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CishQ62225 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CishQ62225 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CishQ62225 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CishQ62225 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.09■□□□□ 0.01
CishQ62225 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CishQ62225 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CishQ62225 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CishQ62225 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CishQ62225 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.09■□□□□ 0.01
CishQ62225 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
CishQ62225 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.09■□□□□ 0.01
CishQ62225 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.09■□□□□ 0.01
CishQ62225 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.09■□□□□ 0.01
CishQ62225 Mir8098-201ENSMUST00000184011 137 ntBASIC15.09■□□□□ 0.01
CishQ62225 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CishQ62225 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.09■□□□□ 0.01
CishQ62225 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
CishQ62225 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CishQ62225 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
CishQ62225 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CishQ62225 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CishQ62225 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.09■□□□□ 0.01
CishQ62225 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CishQ62225 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.09■□□□□ 0.01
CishQ62225 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CishQ62225 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
CishQ62225 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
CishQ62225 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CishQ62225 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CishQ62225 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.08■□□□□ 0
CishQ62225 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.08■□□□□ 0
CishQ62225 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CishQ62225 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CishQ62225 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.08■□□□□ 0
CishQ62225 Gm8097-201ENSMUST00000117903 829 ntBASIC15.08■□□□□ 0
CishQ62225 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.08■□□□□ 0
CishQ62225 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.08■□□□□ 0
CishQ62225 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CishQ62225 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CishQ62225 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CishQ62225 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms