Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VcanQ62059 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VcanQ62059 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VcanQ62059 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.79□□□□□ -0.04
VcanQ62059 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VcanQ62059 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VcanQ62059 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VcanQ62059 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VcanQ62059 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.79□□□□□ -0.04
VcanQ62059 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VcanQ62059 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
VcanQ62059 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VcanQ62059 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
VcanQ62059 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VcanQ62059 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VcanQ62059 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
VcanQ62059 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VcanQ62059 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VcanQ62059 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VcanQ62059 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VcanQ62059 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VcanQ62059 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VcanQ62059 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.78□□□□□ -0.04
VcanQ62059 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VcanQ62059 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VcanQ62059 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VcanQ62059 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VcanQ62059 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VcanQ62059 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VcanQ62059 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
VcanQ62059 Gm29541-201ENSMUST00000191351 678 ntBASIC14.78□□□□□ -0.04
VcanQ62059 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
VcanQ62059 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VcanQ62059 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.78□□□□□ -0.04
VcanQ62059 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VcanQ62059 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.78□□□□□ -0.04
VcanQ62059 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.78□□□□□ -0.04
VcanQ62059 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VcanQ62059 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VcanQ62059 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VcanQ62059 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
VcanQ62059 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VcanQ62059 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
VcanQ62059 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
VcanQ62059 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
VcanQ62059 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
VcanQ62059 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.77□□□□□ -0.04
VcanQ62059 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
VcanQ62059 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.04
VcanQ62059 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
VcanQ62059 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
VcanQ62059 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VcanQ62059 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.77□□□□□ -0.04
VcanQ62059 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.77□□□□□ -0.04
VcanQ62059 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.77□□□□□ -0.04
VcanQ62059 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VcanQ62059 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VcanQ62059 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VcanQ62059 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VcanQ62059 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.76□□□□□ -0.05
VcanQ62059 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.76□□□□□ -0.05
VcanQ62059 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.76□□□□□ -0.05
VcanQ62059 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VcanQ62059 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
VcanQ62059 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VcanQ62059 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
VcanQ62059 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VcanQ62059 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VcanQ62059 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VcanQ62059 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VcanQ62059 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.76□□□□□ -0.05
VcanQ62059 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
VcanQ62059 Gm9063-201ENSMUST00000223299 582 ntBASIC14.76□□□□□ -0.05
VcanQ62059 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VcanQ62059 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
VcanQ62059 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VcanQ62059 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VcanQ62059 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VcanQ62059 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VcanQ62059 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VcanQ62059 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VcanQ62059 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.75□□□□□ -0.05
VcanQ62059 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VcanQ62059 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VcanQ62059 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
VcanQ62059 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VcanQ62059 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VcanQ62059 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.75□□□□□ -0.05
VcanQ62059 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.75□□□□□ -0.05
VcanQ62059 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
VcanQ62059 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
VcanQ62059 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VcanQ62059 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
VcanQ62059 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VcanQ62059 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VcanQ62059 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VcanQ62059 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VcanQ62059 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.75□□□□□ -0.05
VcanQ62059 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VcanQ62059 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms