Protein–RNA interactions for Protein: Q61850

Foxc2, Forkhead box protein C2, mousemouse

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc2Q61850 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc2Q61850 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc2Q61850 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc2Q61850 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc2Q61850 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc2Q61850 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc2Q61850 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc2Q61850 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc2Q61850 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc2Q61850 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc2Q61850 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.55□□□□□ -0.4
Foxc2Q61850 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc2Q61850 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc2Q61850 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc2Q61850 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc2Q61850 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc2Q61850 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc2Q61850 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.55□□□□□ -0.4
Foxc2Q61850 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc2Q61850 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc2Q61850 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc2Q61850 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc2Q61850 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc2Q61850 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc2Q61850 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Foxc2Q61850 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc2Q61850 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Foxc2Q61850 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc2Q61850 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc2Q61850 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc2Q61850 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc2Q61850 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc2Q61850 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc2Q61850 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc2Q61850 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc2Q61850 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc2Q61850 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc2Q61850 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.54□□□□□ -0.4
Foxc2Q61850 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc2Q61850 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc2Q61850 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc2Q61850 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc2Q61850 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc2Q61850 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.54□□□□□ -0.4
Foxc2Q61850 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc2Q61850 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc2Q61850 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc2Q61850 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc2Q61850 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc2Q61850 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc2Q61850 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc2Q61850 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Foxc2Q61850 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Foxc2Q61850 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc2Q61850 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc2Q61850 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Foxc2Q61850 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc2Q61850 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc2Q61850 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Foxc2Q61850 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc2Q61850 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc2Q61850 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc2Q61850 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Foxc2Q61850 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc2Q61850 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc2Q61850 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc2Q61850 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Foxc2Q61850 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc2Q61850 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc2Q61850 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.53□□□□□ -0.4
Foxc2Q61850 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.53□□□□□ -0.4
Foxc2Q61850 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc2Q61850 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Foxc2Q61850 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.53□□□□□ -0.4
Foxc2Q61850 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Foxc2Q61850 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc2Q61850 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc2Q61850 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc2Q61850 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc2Q61850 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc2Q61850 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc2Q61850 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.53□□□□□ -0.4
Foxc2Q61850 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc2Q61850 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Foxc2Q61850 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc2Q61850 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc2Q61850 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc2Q61850 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Foxc2Q61850 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc2Q61850 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc2Q61850 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc2Q61850 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Foxc2Q61850 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Foxc2Q61850 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Foxc2Q61850 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.52□□□□□ -0.4
Foxc2Q61850 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Foxc2Q61850 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Foxc2Q61850 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Foxc2Q61850 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Foxc2Q61850 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms